| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU1158 |
|---|
| Symbol | sodA |
|---|
| ID | 2688439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 1263496 |
|---|
| End bp | 1264074 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637125832 |
|---|
| Product | superoxide dismutase |
|---|
| Protein accession | NP_952211 |
|---|
| Protein GI | 39996260 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000413259 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATG AAGCAAAAGA CTATTCGAAA CTGATCGGGA TGGCGGGATT CAGCGAGGCT
CTCCTGAAGA ACCATTTCAC CCTTTATCAG GGTTATGTGA CCAATACGAA CAAGGTGCTC
GACATCCTCG CCAAAATGCT CGCCGACGGT GCCACTGCCA CTCCCGAGTA TGCGGAGCTG
AAGCGGCGCC TGGGATGGGA GTTCAACGGC ATGCGGCTCC ACGAGTTCTA TTTCGAGAAT
CTCGGCGGCA ACGGTGCCAT CGACCAGGCC GGCAAGCTGG CCGCGAAAAT TGTTGCCGAC
TTCGGCAGCT ATGAGGCGTG GGAGAAGGAT TTCCGGGCCA CCGGCGCCAT GCGGGGTATC
GGCTGGGCAG TGCTCTACCA GGATTCGGCC ACCGGCAAGC TCATTAACTT CTGGGTCAAC
GAGCACGACG TTGCTCATCC GGCCGGCTGC ACTCCCATCC TGATCATGGA TGTCTTCGAG
CATGCCTTTA TGCTCGATTA CGGTCTCAAG CGTCCCGACT ACATCGAGGC CTTCTTCAAG
AATATCGACT GGAAGGCCGC CGAGGCACGG TTGAAATAA
|
|---|
| Protein sequence | MAYEAKDYSK LIGMAGFSEA LLKNHFTLYQ GYVTNTNKVL DILAKMLADG ATATPEYAEL
KRRLGWEFNG MRLHEFYFEN LGGNGAIDQA GKLAAKIVAD FGSYEAWEKD FRATGAMRGI
GWAVLYQDSA TGKLINFWVN EHDVAHPAGC TPILIMDVFE HAFMLDYGLK RPDYIEAFFK
NIDWKAAEAR LK
|
|---|
| |