Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU1116 |
Symbol | |
ID | 2686881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 1201440 |
End bp | 1202177 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637125785 |
Product | hypothetical protein |
Protein accession | NP_952169 |
Protein GI | 39996218 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3605] Signal transduction protein containing GAF and PtsI domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0602606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTGT CGCGTTGTCG AAAGTGCGGA AGAGTGATGA AGGGCGAGCG GATCGATCCG TACCGCGTCA AGCTGACCTG CTCGTGTGGC TTCTCCGACT TCCGCACAAT GACCGAAAAG GTTAAGACCG TGAACCCTTT TTTCCAGAAG GGCGGCTTCA GCCCTCTGCT GGAAAGTGAG CGGGGAAAGA TGGTCCTAAC CATGCAGCGG GCCAACCGGG AGCACCTTGA GATTATTTCG TTGGAAGAGA TCAGCATGCT CGTCTCTTCC GACTTTGATC TTCCCGAGGT GCTTCAGCAT GTGACCGCCA AGGTGGCGAC GCAGCTCAAG GTGAGCGTCT GCAATATCTA CCTGCGCGAG GGAGACGAGG TCGTTCTCGC AGCGACCCAT GGCTTTGACC CTGCCTTCAT CGGCAAGATC AGGATCAAAA TCGGGGACGG AATAACGGGC TCCGTTGCCC GCGATGGCCA GTACATCTCC CTGAGCCGTG CCTCCCAGGA TCCCCGCTAT CGCTATTTCC CCGAGCTCCA GGAGGAAAAG TACAACTCCA TGCTCTCTTT TCCCATTGGT GACAAGAAGG AGGTTTACGG CGTCATCAAC CTCAATACCA CGTCTATCAG GTCATTCCAT GAGGACGAAA TCTATTTCGT ATCAATTATC GCCAACCTCA TTCTTACCGC CATAAAGCTG CGGCAGCAGG TCGCTTCGTC CCGCAAGGCC GCTGAGGCAT CTGCTTGA
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Protein sequence | MHLSRCRKCG RVMKGERIDP YRVKLTCSCG FSDFRTMTEK VKTVNPFFQK GGFSPLLESE RGKMVLTMQR ANREHLEIIS LEEISMLVSS DFDLPEVLQH VTAKVATQLK VSVCNIYLRE GDEVVLAATH GFDPAFIGKI RIKIGDGITG SVARDGQYIS LSRASQDPRY RYFPELQEEK YNSMLSFPIG DKKEVYGVIN LNTTSIRSFH EDEIYFVSII ANLILTAIKL RQQVASSRKA AEASA
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