Gene GSU1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU1116 
Symbol 
ID2686881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp1201440 
End bp1202177 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content55% 
IMG OID637125785 
Producthypothetical protein 
Protein accessionNP_952169 
Protein GI39996218 
COG category[T] Signal transduction mechanisms 
COG ID[COG3605] Signal transduction protein containing GAF and PtsI domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0602606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTGT CGCGTTGTCG AAAGTGCGGA AGAGTGATGA AGGGCGAGCG GATCGATCCG 
TACCGCGTCA AGCTGACCTG CTCGTGTGGC TTCTCCGACT TCCGCACAAT GACCGAAAAG
GTTAAGACCG TGAACCCTTT TTTCCAGAAG GGCGGCTTCA GCCCTCTGCT GGAAAGTGAG
CGGGGAAAGA TGGTCCTAAC CATGCAGCGG GCCAACCGGG AGCACCTTGA GATTATTTCG
TTGGAAGAGA TCAGCATGCT CGTCTCTTCC GACTTTGATC TTCCCGAGGT GCTTCAGCAT
GTGACCGCCA AGGTGGCGAC GCAGCTCAAG GTGAGCGTCT GCAATATCTA CCTGCGCGAG
GGAGACGAGG TCGTTCTCGC AGCGACCCAT GGCTTTGACC CTGCCTTCAT CGGCAAGATC
AGGATCAAAA TCGGGGACGG AATAACGGGC TCCGTTGCCC GCGATGGCCA GTACATCTCC
CTGAGCCGTG CCTCCCAGGA TCCCCGCTAT CGCTATTTCC CCGAGCTCCA GGAGGAAAAG
TACAACTCCA TGCTCTCTTT TCCCATTGGT GACAAGAAGG AGGTTTACGG CGTCATCAAC
CTCAATACCA CGTCTATCAG GTCATTCCAT GAGGACGAAA TCTATTTCGT ATCAATTATC
GCCAACCTCA TTCTTACCGC CATAAAGCTG CGGCAGCAGG TCGCTTCGTC CCGCAAGGCC
GCTGAGGCAT CTGCTTGA
 
Protein sequence
MHLSRCRKCG RVMKGERIDP YRVKLTCSCG FSDFRTMTEK VKTVNPFFQK GGFSPLLESE 
RGKMVLTMQR ANREHLEIIS LEEISMLVSS DFDLPEVLQH VTAKVATQLK VSVCNIYLRE
GDEVVLAATH GFDPAFIGKI RIKIGDGITG SVARDGQYIS LSRASQDPRY RYFPELQEEK
YNSMLSFPIG DKKEVYGVIN LNTTSIRSFH EDEIYFVSII ANLILTAIKL RQQVASSRKA
AEASA