Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0830 |
Symbol | |
ID | 2687342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 890219 |
End bp | 893323 |
Gene Length | 3105 bp |
Protein Length | 1034 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637125502 |
Product | CzcA family heavy metal efflux protein |
Protein accession | NP_951887 |
Protein GI | 39995936 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGGAGA AACTGATTGC CTATACGCTG CGCCAGAAGG GGATGGTCAT CTTCCTGGCG TTGCTGATTA TCGTCATTGG AGTGTATTCC TACGCGAAAC TGCCCATCGA CGCCTTCCCG GACGTGACCA ACATCCAGGT TGAGGTCGTC AGCCATGCCG ACGGCCTGTC GGCGATCGAG ATCGAGCGGA ACGTCACCTA CCCGATCGAG ATGGCCATGC GCGGCCTGCC CGACATCGAG CAGATGCGCT CGGTCACCAA GTTCGGCCTG TCGATTGTTA CCATTGTCTT CAAGGACAAC GTGGACATCT ACTTTGCCCG GCAACTGGTG TTCGAGCGTC TGGCCGAGGC CCGGGAGAAG GTGCCGAAGG GGGTCGAAGT CGCCATGGGG CCCATCGGCA CGGCCATGGG AGAGATCTAT CAGTACACCC TGGAAGGGGA GATGCCCCGA GACCCCCGGC AGAAGATCGA GTACCTGACC AACCTGCGGA CCATCCAGGA GTGGATCGTC ACCCCGCAGC TCAAAAGTGT TGCCGGCGTC AACGAGATCA ACTCTTTCGG GGGCTACTTC AAGCAGTACC AAGTGCTCGT ATCGCCTGAA AAACTCCTGA AGTACGGCGT TACCGTGGAT GACGTCTATA CCGCCATCGG CAGCAACAAC GAAAACGTCG GCGGCAACCT GCTGGAGCGG GGGACGGACC AGTACATCGT CCGCGGTGTC GGCCTGATCA CGGATACGAA CGATATTGGA ACTATCGTCC TGAAGTCCTC CGGCGGCACT CCCACCTATA TCCGCGACGT GGCCGAAGTC AAGGTGGGCG AGGCGGTCCG CATGGGCGCG GCCATGAAGG ACGGCAAGGA CGAGTGCGTC GGCGGCATCG TCATGATGCT GCGGGGGGAA AACAGCCGCG ACGTGGTGCG CCGGGTCGCG GATAAAGTGA AGGAGATCAA CGAAAACAAC GTGCTGCCGG AAGGGATCAA AATCGTCCCC TTCTACGACC GCAGCGACAT CGTCAAGGCA AGCGTGGGGA CGGTCAACAG GGCGCTCATC GAGGGATCGA TCCTCGTCCT GATTATCCTG TACCTGCTGC TGAACAGCGT CCGGGGGAGC ATCGTGGTCC TGATCGCGCT GCCGCTCTCC CTGCTGGCCA CCTTCATCGT GATGAGGCTC ACGGGGATCA GCGCCAACCT CATGTCGCTG GGCGGCCTGG CCATCTCCAT CGGGATGATC ATCGACACCA CGATCATTCA GGTGGAGAAC GTCCAGCGCC ACCTGAGCGA GGGAGGGGAG CACCATCCCA AGCTGCTAAC GGTGCTGAAG GCCGTCATGG AGGTCCGCAA GCCGAGCATC TTCGGCGAAC TGATCATCGC GCTCACCTTT ATCCCGATCC TGTCCCTGGA GGGAATCGAA GGTAAGATGT TCGGGCCCCT GGCCATCACC GTGGCCATTG CGCTGCTGTC CTCCCTGTTT CTCTCCATTT TCATCATTCC GGTGCTCTGC AGCCTGTTCC TGAAACCGCA GCCGGAGCAG GAGAGCTTCA TCATGCGGCA CGCCCACCGG CTCTATCTGC CGCTGCTCGA CTACGCCATG GCCAAAAAGC GCGTGGTGCT GGGCGTTGCC GGCGTGCTCC TGGTGGCGTC GGTGCTTCTG GTCTCCCGGC TGGGCACCGA GTTCATTCCG ACCATGGACG AAGGCGCATT CGACATGGAC GTTTCCATGC TCCCCGGCGT TTCCCTGGAC AAGGCCATGG AGGTCAACCA GCGCGTCGCA GAGAAGCTGA AGCAGTTCCC CGAGCTGGGC ACGGTGGTGT CGCGGACCGG CCAGACCGGG GTGGCCCTGG ACACCAGGGG CTCGGACAAG ACCGGCTACG TGGGGATCTT CAAGCCGAAG GACGAATGGC CGCGGGACAT CTCGAAGGAG GAGCTGACCA ACGAGATGCG CGAGTCCCTG GAATCGGTAG CCGGCATCAC CTTCGGCTTC AGCCAGCCGA TCCAGTGCCG CATCGACGAA CTGGTGGCCG GCACCCGGGC CCAGTTGATC CTGAAGCTCT TCGGCGACGA TATCGACGTG CTCAGCGCTA AATCCCAGGA AATCGCCAAG GTGCTCTCCA CCATCAGGGG AGGGACCGAC CTGAACGCGG AGAAGATCTC GGGCCAGCCG TATCTCACCG TCGACATCGA CCGGTCCAGG ATCGCCCGGT ACGGCCTGAA CATCAGCGAC GTGCAGAAGG TGATCGAGAT CGCGGTTGCC GGCAAGGCAG CCTCGCAGCT CTACGAAGAG AACCGCAGCT TCGACATAAC CGTGCGCCTG CCGGAAGAAA AGCGGAACTC TCTGGACGCG ATCAAGAACC TGATCATCAC TACGAAAACC GGCATCAACG TGCCCCTCGA ACAGTTGGCC GAGGTGAAGA TGATCGAGGG CCCGGTGCAG ATCAGCCGCC AGGACGGGGT GCGCCGCATC GGCATTGAAA TGAACATCAC CGGCCGGGAT ATCGGCGGTT TCGTGGCCGA GGCGAAACAG AAGATCAAAG AGCAGGTCAA GCTCCCCCCC GGTTACTACC TTACCTGGGG CGGACAGTTC GAGAACCAGC AGCGGGCCAT GAAAAAGCTG ATGATCATCG GGCCGGTGGC CATCGGCCTG ATTCTGCTGT TGCTCTACGT GACCTTCCGG TCCATCCGCC TGGCGCTCCT AGTCATCTCC AACCTCCCGT TCGCCCTGAT CGGCGGCGTC TTCTCCCTGT TCATCTCGGG CCAGTACCTG TCAGTGCCGG CATCCGTCGG CTTCGTGGTC CTCTTCGGCG TGGCCGTGCT GAACGGCCTG GTGCTGGTGT CGCGGATATC CCAATTGCGG GATGAAGGCT TCGAGCTGCA GGAGGCCATC CGGCGGGGGA CCGTCGACCG CCTGCGGCCG GTGCTGATGA CCGCATCCAT CGCCATATTC AGCCTGATTC CCATGCTTCT GGCCAGCGGC ACCGGGTCCG AAATCCAGAA GCCGCTGGCA ACGGTTGTGG TCGGTGGCCT GGTAACGTCC ACCCTGCTGA CGCTGCTGGT CATCCCGTCG GTGTACAGCT GGTTTGAGAA GAGAAGCGTG GAAGAGGAGA TGTAG
|
Protein sequence | MLEKLIAYTL RQKGMVIFLA LLIIVIGVYS YAKLPIDAFP DVTNIQVEVV SHADGLSAIE IERNVTYPIE MAMRGLPDIE QMRSVTKFGL SIVTIVFKDN VDIYFARQLV FERLAEAREK VPKGVEVAMG PIGTAMGEIY QYTLEGEMPR DPRQKIEYLT NLRTIQEWIV TPQLKSVAGV NEINSFGGYF KQYQVLVSPE KLLKYGVTVD DVYTAIGSNN ENVGGNLLER GTDQYIVRGV GLITDTNDIG TIVLKSSGGT PTYIRDVAEV KVGEAVRMGA AMKDGKDECV GGIVMMLRGE NSRDVVRRVA DKVKEINENN VLPEGIKIVP FYDRSDIVKA SVGTVNRALI EGSILVLIIL YLLLNSVRGS IVVLIALPLS LLATFIVMRL TGISANLMSL GGLAISIGMI IDTTIIQVEN VQRHLSEGGE HHPKLLTVLK AVMEVRKPSI FGELIIALTF IPILSLEGIE GKMFGPLAIT VAIALLSSLF LSIFIIPVLC SLFLKPQPEQ ESFIMRHAHR LYLPLLDYAM AKKRVVLGVA GVLLVASVLL VSRLGTEFIP TMDEGAFDMD VSMLPGVSLD KAMEVNQRVA EKLKQFPELG TVVSRTGQTG VALDTRGSDK TGYVGIFKPK DEWPRDISKE ELTNEMRESL ESVAGITFGF SQPIQCRIDE LVAGTRAQLI LKLFGDDIDV LSAKSQEIAK VLSTIRGGTD LNAEKISGQP YLTVDIDRSR IARYGLNISD VQKVIEIAVA GKAASQLYEE NRSFDITVRL PEEKRNSLDA IKNLIITTKT GINVPLEQLA EVKMIEGPVQ ISRQDGVRRI GIEMNITGRD IGGFVAEAKQ KIKEQVKLPP GYYLTWGGQF ENQQRAMKKL MIIGPVAIGL ILLLLYVTFR SIRLALLVIS NLPFALIGGV FSLFISGQYL SVPASVGFVV LFGVAVLNGL VLVSRISQLR DEGFELQEAI RRGTVDRLRP VLMTASIAIF SLIPMLLASG TGSEIQKPLA TVVVGGLVTS TLLTLLVIPS VYSWFEKRSV EEEM
|
| |