| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0782 |
|---|
| Symbol | |
|---|
| ID | 2685290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 842270 |
|---|
| End bp | 843373 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637125454 |
|---|
| Product | nickel-dependent hydrogenase, small subunit |
|---|
| Protein accession | NP_951839 |
|---|
| Protein GI | 39995888 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0547122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGG AAGCTGTGCT TCGCGGCGGC GTGTCGCGAA GGGATTTCAT GAAGACCTGT
GTTGCAGCCA CCGCTATCAT GGGGCTGCCC TACAGCATGC ACACAAAGGT GGCCGAAGCT
GCCCAGAAGG CCGGCCGGCC GCCGGTGATC TGGCTTCACT TCCAGGAGTG CACCGGCTGT
TCAGAGTCGC TTCTCCGTTC GGGGCACCCG GATGTTTCCG AACTGATACT TGACATGATT
TCGCTGGACT ACCATGAAAC CCTCATGGTC GGCTCGGGGC ATCAGGCGGA GCAGTCGCTC
CACGACTCCA TGAAGGCGAA CCACGGCAAG TACATCCTGG TCGTGGAGGG TGGCATCCCC
ACCAAGGACA ACGGCATCTA CTGCAAGGTG GGCGGCAAGA CCGCCGTGGA TTCCCTGACC
ACCGCCGCCG AAGGGGCTGC CGCCATCATC ACCATCGGCA CCTGCGCCTC ATACGGCGGC
ATCCAGTCGG CTCCTCCCAA CCCTACGGGC GCCGTGGGGG TCCGCGACCT GATCAAGAAC
AAGCCGATCG TCAACATTCC CGGCTGTCCG CCCAACCCCT ACAACTTCCT CTCCACGGTC
CTCTACTACC TGACGTTCAA CAAGCTCCCC GAGCTCGACG CACTGGGCCG TCCCAAGTTT
GCCTACGGCC GGAAGATTCA CGAGCACTGC GAGCGCCGTC CCCACTTCGA CGCGGGCCGC
TTCGCCACCG CCTACGGCGA CAAGACCCAT GCCGAGGGGT ACTGCCTCTA CAAGCTGGGC
TGCAAGGGGC CGGCGACATT CGCCAACTGC TCCGTCACCC GTTTCAACGA CGTGGGGGTA
TGGCCCGTTT CCGTCGGCCA CCCGTGCATT GGTTGCACCG AGCCGGATAT CCTCTTCAAG
AAGCCCATCG CCGAGAAGCT CCAGATCCAC CTGCCCACGC CGCCCGACAC CTATGCTCCG
GCCGAACTGG GGCAGAAGGG TCCCGGCGTG AGCCCGGCGG CCACCGGTCT CGTTGGCCTG
GCCGGCGGCG TAGCCCTGGG TGCCGGCGCC ATGCTGGCCA AGAAGCTGCC CAGCGGGGAG
GAAGGTCATG AAAAGCACGA CTAG
|
|---|
| Protein sequence | MGKEAVLRGG VSRRDFMKTC VAATAIMGLP YSMHTKVAEA AQKAGRPPVI WLHFQECTGC
SESLLRSGHP DVSELILDMI SLDYHETLMV GSGHQAEQSL HDSMKANHGK YILVVEGGIP
TKDNGIYCKV GGKTAVDSLT TAAEGAAAII TIGTCASYGG IQSAPPNPTG AVGVRDLIKN
KPIVNIPGCP PNPYNFLSTV LYYLTFNKLP ELDALGRPKF AYGRKIHEHC ERRPHFDAGR
FATAYGDKTH AEGYCLYKLG CKGPATFANC SVTRFNDVGV WPVSVGHPCI GCTEPDILFK
KPIAEKLQIH LPTPPDTYAP AELGQKGPGV SPAATGLVGL AGGVALGAGA MLAKKLPSGE
EGHEKHD
|
|---|
| |