Gene GSU0726 details

Gene Information

• Locus tag: GSU0726
• ID: 2685516
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 774287
• End bp: 774949
• Gene Length: 663 bp
• Protein Length: 220 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637125398
• Product: chemotaxis protein CheD, putative
• Protein accession: NP_951783
• Protein GI: 39995832
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.345445
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGGAGGC ACATTTTACA GGCATGCGGG ATACGCCGAT TCTGCTATAC TGTAACAATG 
CGTCATCAAC GCCTCGAAGG CCGTCACATT ATCCGTATCG CTCCCGGCGA ATACCACGTC 
ACTACAGGCG GGGGCGTCAT TTCGACGCTT CTCGGTTCGT GCGTGGCCGC CTGCCTGTTC 
GACTCGGAAA GCGGCGTGGC CGGGATGAAT CATTTTCTGC TCAGCAATCA CCGCTACTCC 
CGCACCATGC CCTTCTGCTT CACCGAGGCG GGGCGCTACG GCATCCACTC CATGGAACTG 
CTTATCAACT CTCTCATGCG CCACGGTGCG CGGCGGGAGA ACCTCCGCGC CAAGGCCTTC 
GGCGGTGCCT CGATTCTGGT CAATCGCGCC GAGGTCGGCA ACTTTTCCTG TGTCGGCAGC 
GTCAATGCCC GGTTTGTCCG GGAGTTTCTC GCCAATGAAG GGATTCCGCT CCTCTCCGCC 
GACCTGGAGG GGGAGCGGGG CCGCGTGATC TATTTCGATA CAACGGACTT TTCCGTATTC 
GTCCGCAAGA TCCGGCTCCA GCGGAGCCTC GTGGTGGCCA AGCGCGACCG GAACGTGTGG 
GAACACGGGG TCCAGGCCCA TGATGTGGAA CCGGACTCGG TCGACCTCTG GCTGCCGGGG 
TAG 

 

Protein sequence

MRRHILQACG IRRFCYTVTM RHQRLEGRHI IRIAPGEYHV TTGGGVISTL LGSCVAACLF 
DSESGVAGMN HFLLSNHRYS RTMPFCFTEA GRYGIHSMEL LINSLMRHGA RRENLRAKAF 
GGASILVNRA EVGNFSCVGS VNARFVREFL ANEGIPLLSA DLEGERGRVI YFDTTDFSVF 
VRKIRLQRSL VVAKRDRNVW EHGVQAHDVE PDSVDLWLPG