| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0580 |
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| Symbol | ppdK |
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| ID | 2685868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 610378 |
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| End bp | 613044 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637125246 |
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| Product | pyruvate phosphate dikinase |
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| Protein accession | NP_951638 |
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| Protein GI | 39995687 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGCA AGTATGTTTA CTTCTTCGGC AATGGCCAGG CCGAAGGAAA GGCCGAGATG
AAGAATCTGC TGGGGGGCAA GGGTGCCAAC CTGGCGGAGA TGACAGCGAT CGGGCTCCCG
GTTCCGCCGG GGTTCACCAT CACCACCGAG GTCTGCACCT ACTACTACGC CAACAACCGG
AGCTATCCGC CGACCCTGGC GGCCGAGGTT GCCGATAACC TGAAGAAGGT GGAGGCCCTC
ATGGGGCGCA CCTTCGGCGA CCGGAACAAC CCCCTGCTGG TGTCGGTCCG TTCCGGCGCC
CGGGCTTCCA TGCCGGGTAT GATGGATACC ATCCTTAACC TGGGACTCAA CGATGAGACA
GTCCAGGGAA TCATCGCCCA GAGCGGAGAC GAGCGTTTCG CCTACGATGC CTACCGCCGC
TTCGTGCAGA TGTATTCCGA TGTGGTCATG GGCATGGACA AGGACCTGCT CGAACACCTC
TTGGAGCAGA AGAAGGAGGA GAAAGGGGTC CATCTGGACA CGGATCTCAC CGCCGCCGAC
TGGAAGGAAC TGGTCGGCAA GTTCAAGGCC AAGATCCGCG AGACCCTCGG CAAGGAGTTC
CCCGAAGATC CGCAGGAGCA GCTCTGGGGC GCCGTGGGTG CCGTGTTCGG CTCCTGGATG
AACCAGCGGG CCATCACCTA TCGCCGGCTC AATAACATTC CCGCCGACTG GGGCACCGCA
GTCAACGTTC AGTCCATGGT TTACGGCAAC ATGGGGAACG ACTGCGCCAC CGGCGTTGCC
TTTACCCGCG ACCCCTCCAC TGGTGAAAAC TATTTCTACG GCGAGTACCT GGTGAACGCC
CAGGGTGAGG ACGTGGTGGC CGGCATCCGA ACCCCGCAGC CCATCAACCG GGCCAACAGC
AAGGACACCA CCCTCCCGGC CATGGAAGAC GTGCTGCCCG AGTGCTATCA GCAGCTCGTC
CAGATCCGCG GCATCCTTGA GAAGCACTAC AGGGACATGC AGGACATCGA GTTCACCATC
GAGAAGGGCA AGCTGTTCAT GCTCCAGACC CGCAACGGCA AGCGGACCGC CAAGGCGGCC
ATCAAGATCG CCGTGGACAT GGTGCGGGAG GGGCTCATCG ACGAAAAGAC CGCTGTGCTG
CGGGTGTCTC CGTCCCAGCT TGACCAGCTC CTCCATCCGT CCCTTGATCC CAAGGCTCAG
AAAAGGGTCA TTGCCAAGGG CCTTCCTGCC TCCCCCGGAG CGGCCAGCGG CGAGGTTGTC
TTCACCGCGG ACGAGGCTGA GGCTGCCGCC CGCCTGGGGC TCAAGGTGAT CCTAGTTCGG
GTCGAGACGA GCCCCGAGGA TATTCACGGC ATGCACGCGG CCCAGGGGAT CCTCACCGCC
CGGGGCGGCA TGACCTCCCA CGCGGCGGTG GTCGCAAGGG GCATGGGCAA GTGCTGCGTC
GCCGGCTGCG GCGACATCAA GGTCGATTAC GCCGGGAGCC AGTTCGCCAC CGCCAAGGGG
CAGGTGGTCA AGAAGGGGGA TGTCATCACC CTGGACGGCT CCACCGGCGA GGTGATGCTC
GGCGAGGTGC CGACAGTTCC GCCGCAGCTT ACCGGGGACT TCGGCACCCT GATGGAGTGG
GTGGACCGCT TCCGCAAGTT GAAAGTGCGA ACTAATGCCG ACACCCCCAA TGATTCGCGG
GTGGCCCGCG AGTTCGGCGC CGAGGGGATC GGCCTCTGCC GCACCGAGCA CATGTTCTTC
GAGGCCGACC GGATTGCCGC CGTGCGCGAG ATGATTCTCG CCGAGGACGT TGAGGGGCGC
AAGAAGGCCC TTGCCAAGAT TCTGCCCATG CAGAAGGGTG ACTTCGTCGG CATCTTCAGG
GAGATGAAAG GACTGCCCGT CACCATTCGC CTGCTGGATC CGCCGCTCCA CGAGTTCCTT
CCCCACGAGG ACAAGGACAT CGATGCCCTG GCCAAGACCA TGGGGGTAAC GCCTCAATCG
CTCAGGGCCA AGGTGGATTA CCTCCACGAG TTCAACCCGA TGCTCGGCCA CCGCGGCTGC
CGGCTTGGGC TCACCTTCCC GGAGATTTAC GACATGCAGG TGCAGGCCAT CATGGAAGCC
GCCTGCGAAC TGACCAAGAA CGAAGGGTTC AGCATCGTGC CCGAGATCAT GATCCCGCTG
GTGGGGGTGG TGACCGAGCT TGCCCGCCTG CGGGAGAACA CGGTGCGCGT GTGCGAGGAG
GTCGTCGCCG CCTACGGCGT CAAGGTGGAG TACCTGATCG GCACCATGAT CGAGCTCCCC
CGTGCCGCCC TCACCGCCGA TGAGATTGCC CGGGAGGCCG AATTCTTCTC CTTCGGCACC
AACGACCTGA CCCAGACCAC GTTCGGCCTT TCCCGCGACG ATGCCGGCAA GTTCCTGCCG
TTCTATGTGG AAACCGGTTT GCTGGAAGAC GACCCCTTTG TCTCCCTTGA CCAGAACGGG
GTCGGTCTTC TTGTGAAGAT GGCAGTGGAA AAAGGGCGCG CCACCCGCCC CGGCATCAAG
CTCGGCATTT GCGGCGAGCA TGGCGGCGAT CCGTCCTCGG TCATCTTCTG CCACCAGATC
GGTCTCGACT ATGTATCCTG CTCGCCGTTC CGGGTGCCCA TCGCCCGGCT CGCGGCGGCC
CATGCCGCCC TGGAGGAAGG GAAGTAG
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| Protein sequence | MAGKYVYFFG NGQAEGKAEM KNLLGGKGAN LAEMTAIGLP VPPGFTITTE VCTYYYANNR
SYPPTLAAEV ADNLKKVEAL MGRTFGDRNN PLLVSVRSGA RASMPGMMDT ILNLGLNDET
VQGIIAQSGD ERFAYDAYRR FVQMYSDVVM GMDKDLLEHL LEQKKEEKGV HLDTDLTAAD
WKELVGKFKA KIRETLGKEF PEDPQEQLWG AVGAVFGSWM NQRAITYRRL NNIPADWGTA
VNVQSMVYGN MGNDCATGVA FTRDPSTGEN YFYGEYLVNA QGEDVVAGIR TPQPINRANS
KDTTLPAMED VLPECYQQLV QIRGILEKHY RDMQDIEFTI EKGKLFMLQT RNGKRTAKAA
IKIAVDMVRE GLIDEKTAVL RVSPSQLDQL LHPSLDPKAQ KRVIAKGLPA SPGAASGEVV
FTADEAEAAA RLGLKVILVR VETSPEDIHG MHAAQGILTA RGGMTSHAAV VARGMGKCCV
AGCGDIKVDY AGSQFATAKG QVVKKGDVIT LDGSTGEVML GEVPTVPPQL TGDFGTLMEW
VDRFRKLKVR TNADTPNDSR VAREFGAEGI GLCRTEHMFF EADRIAAVRE MILAEDVEGR
KKALAKILPM QKGDFVGIFR EMKGLPVTIR LLDPPLHEFL PHEDKDIDAL AKTMGVTPQS
LRAKVDYLHE FNPMLGHRGC RLGLTFPEIY DMQVQAIMEA ACELTKNEGF SIVPEIMIPL
VGVVTELARL RENTVRVCEE VVAAYGVKVE YLIGTMIELP RAALTADEIA REAEFFSFGT
NDLTQTTFGL SRDDAGKFLP FYVETGLLED DPFVSLDQNG VGLLVKMAVE KGRATRPGIK
LGICGEHGGD PSSVIFCHQI GLDYVSCSPF RVPIARLAAA HAALEEGK
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