Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0579 |
Symbol | glyS |
ID | 2685658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 608194 |
End bp | 610257 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637125245 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | NP_951637 |
Protein GI | 39995686 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGG AACTGTTTCT CGAAATAGGC ACCGAGGAGA TCCCCGCCGG CTTCCTGCCC AAGGCCATGG CCGACATGGA GGCCATCGTC ACGAAGGAGC TGGAGAACGC CCGCCTTGCC TTCGGCGAGG TGAAGACCTT CGCCACCCCC CGTCGTCTGG CGCTGGTGGT GAAGGGGCTG CCGACAGTTC AGCCCGATGC CGAGATTACC GCCCTGGGGC CGGCCAGGAA CATCGCCTTC GGTCCCGACG GCACGCCGTC CAAGGCGGCC GAGGGCTTCG CCCGTGGCCA GGGGGTCGAC GTGGCGTCCC TGACCCTGGT CTCCACCGAG AAGGGCGAAT ACGTGGCCGC TGTCCGCAAG GAGAGCGGCC GGCCGGTACC GGACCTCCTC GCCGAGATCC TGCCGCGGCT GGTGGGGGGC ATCCCGTTCC GCAAGTCCAT GCGCTGGGCT GATCTGGACG TGCGTTTCGC CCGCCCGATC CACTGGATCG TGGCCCTGTT CGACGGGGTC GTCGTCCCCT TCGCCTTCGG CAACGTCCAG AGCGGCAATG TCTCGCGGGG GCACCGGTTC ATGGCCAACC AGCCGTTCCC GGTCCGTGAC TTCGCCCACT ACCTGGACGA GTGCGAGCGG CACTTCGTGA TCCCCGATCC CGAGCGGCGA AAGGAAACCA TCCGCCGGGA GATCCACCGG GTTGCCAAGA CCGCCGGTGG CCACCTCCTC CCCGACGAGG GACTCCTGGA CGAGGTTGCT TACCTGGTGG AGTACCCCAG CGTGGTCCAC GGCACCTTCT CGCCCGATTT TCTCAAGGTT CCCCGCGAGG TGCTCATCAC CTCCATGCGG AGCCACCAGC GCTACTTCTC CATCGTCGAC GACGCCGGCA AGCTCATGCC CGGTTTCATC ACCATCAACA ATACCCTGAC CGAGGACCCC TCCGTGGTGG TCAAGGGGAA CGAGCGCGTC CTGCGCGCCC GCCTCTCCGA CGCCCGCTTC TTCTTCGAGG AAGATCAGAA GGTGAAGCTG GAGACCCGGG TGGAGTCCTT GAAAAACGTG GTCTACCAGC AGAAGCTCGG CACCTCCTAC GAGAAGATGG AGCGCTTTCG CGCCCTGGCC GAGGGGCTGG CCGACCTCCT CAATCCGGCG GTTAAGGCCA AGACATCCCG GGCCGCCTTC CTCTGCAAGG CCGACCTGGT TTCGGGTATG GTCGGTGAGT TCCCCGAGGT ACAGGGGATC ATGGGCCGTG AGTATGCCCT GCTCCAAGGC GAAGACGCCG AAGTTGCCGC CGCCATCGCC GAGCACTACC TCCCCACCCA GGCCGGTGGG GACCTCCCCG CATCCGACAT CGGCGCCTTC GTCTCCATCG CCGACAAGCT CGATACCATC TGCGGCTGCT TCGGGGTGGG GCTGATCCCC ACCGGTTCGG CCGATCCCTA TGCCCTGCGC CGTTCGGCCC TGGGCATCAT CAACATCATT CTCGACCGGG GCTGCCGCCT CTCGCTGGAA GGAGAGATCG GGAAGGCCCT GGAACTCCTC TCCGCCAAAC TGACCCGCCC CGCCGCCGAG GTGATGGCTG ATGTGCTGGA ATTCTTCCGG GGCCGGTTCG TGAACCTCAT GGCCGACCGC TATCCGGCCG ATGCCGTGGA CGCGGCCATT GCCGCCGGCT TCGACGACCT GGTGGACGCC GAGGCCCGCA TCGGCGCACT GGCGGCCTTC AAGGGGCGCC CGGATTTCGA CTCCCTGGCA GTGGCCTTCA AACGGGTCTG CAACATCGTC AAGGACGGGG TCGATCAGCC CGTGGATGCC GCCCTGTTCC AGGAGCCGGC CGAGGGTGCC CTGTTCGCGG CGTTCCAGCA GGTCCGCGCC GACGTGGAGG CCCGCACCGC ATCCGGCGAT TACCTGGCTG CGCTCACCGG TATTGCCGCT CTCAAGGGCG CCGTGGACGA CTTCTTCGAC AAGGTGATGG TTATGGCCGA GGACGAACGG GTCCGAACAA ACCGGTTAGC ATTGCTGACC GGGATCGCCC GGCTCTTCGG AGGCGTCGCG GACTTCGCGA AGATAGCCGC CTAG
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Protein sequence | MSKELFLEIG TEEIPAGFLP KAMADMEAIV TKELENARLA FGEVKTFATP RRLALVVKGL PTVQPDAEIT ALGPARNIAF GPDGTPSKAA EGFARGQGVD VASLTLVSTE KGEYVAAVRK ESGRPVPDLL AEILPRLVGG IPFRKSMRWA DLDVRFARPI HWIVALFDGV VVPFAFGNVQ SGNVSRGHRF MANQPFPVRD FAHYLDECER HFVIPDPERR KETIRREIHR VAKTAGGHLL PDEGLLDEVA YLVEYPSVVH GTFSPDFLKV PREVLITSMR SHQRYFSIVD DAGKLMPGFI TINNTLTEDP SVVVKGNERV LRARLSDARF FFEEDQKVKL ETRVESLKNV VYQQKLGTSY EKMERFRALA EGLADLLNPA VKAKTSRAAF LCKADLVSGM VGEFPEVQGI MGREYALLQG EDAEVAAAIA EHYLPTQAGG DLPASDIGAF VSIADKLDTI CGCFGVGLIP TGSADPYALR RSALGIINII LDRGCRLSLE GEIGKALELL SAKLTRPAAE VMADVLEFFR GRFVNLMADR YPADAVDAAI AAGFDDLVDA EARIGALAAF KGRPDFDSLA VAFKRVCNIV KDGVDQPVDA ALFQEPAEGA LFAAFQQVRA DVEARTASGD YLAALTGIAA LKGAVDDFFD KVMVMAEDER VRTNRLALLT GIARLFGGVA DFAKIAA
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