Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0575 |
Symbol | cstA |
ID | 2685414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 603597 |
End bp | 605525 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637125241 |
Product | carbon starvation protein A |
Protein accession | NP_951633 |
Protein GI | 39995682 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTGCAA AGGGATTCTG GCTGGTTGTC TCGCTGGTTG CCGCCTGTTC ACTGGCCGTG GTGGCCGGGG TGGTGAATCC GGCGGAAAAG GTGAACGCCC TCTGGCTGGT GACCGCGGCG GCCTGTTTCT ACATGGTCGC CTACCGGTTC TACGGGGCCT TCCTGGCGGC CCGGGTCCTC TCCCTGGATC CGGCGCTCCG CACCCCGGCC CGGCGTCTGG CCGACGGGAT GGATTTCCAC CCCACCAACC GCTGGGTCCT CTTCGGCCAT CATTTCGCGG CCATTGCCGG GGCGGGCCCC CTCATCGGCC CCATGCTGGC GGCCCAGTTC GGCTATCTCC CCGGCTTCCT CTGGATTCTG ATCGGCTCGG TGCTGGTGGG GGCCGTGCAC GACATGGTCA TCCTGGGGGC GTCGGTGCGG CGCAACGGCC GCTCCCTGGC CCAGATCGCC AAGGACGAGA TCGGCCCGGT GGGGGGGCTG GCCGCCTCCC TGGCCATTCT CTTCATCCTG ATCGTGGCCT TGGCCGGCCT GGGCCTGGCG GTGGTCAACT CCCTGGCCAA GAGCCCCTGG GGGACCTTTA CCATCTTTCT CACCATCCCC ATCGCCCTCT TTATGGGGCT CTACCTGTAC AAGATCCGAC CGGGCAGGGT GGGCGAGGTG AGCGCCATCG GCTTCGTACT GCTCTTGGCT GCGGTCTTTG CCGGCCACTA CATTCCCGGC TCACCCATCG AACCGTATTT CAACCTCTCC AAGCACGGCC TGGTGGTGGC CATGGCGGCC TACGGCTTTG TGGCCTCCAT TCTGCCGGTC TGGATGCTCC TCTGCCCCCG CGACTACCTC TCCACCTATA TGAAGATCGG GACGGTGCTG CTGCTGGCCT GCGGGGTCAT CTTCATGGCC CCGACCCTCC AGATGCCGCC GGTGACCCGG TTCGTGAGCG GGGGAGGGCC GATCATCCCC GGCACGCTCT TCCCCTTCAT GTTCATCACC ATCGCCTGCG GGGCCATTTC GGGGTTCCAC TCCCTGATCT CCTCGGGCAC CACCCCCAAG ATGATCACCT CCGAGCGCGA GATCCCGATG ATCGGCTATG GCGCCATGCT GGCCGAGGGA TTCGTGGCGG TCATGGCGCT GGTGGCGGCC ACCATCCTGA TCCCCGGCGA CTACTTCGCC ATCAACACCA AGCTCTCCTT CGACGCCATC GCGGCGCTCG GCTTCCCGGT TGAGCGGGTG CGGGAGCTGT CGGCCTTGGT GGGGACCGAT GTGGCCGGTC GTCCCGGCGG AGCGGTTTCC CTGGCCGTGG GGATGGCTTC CATTCTTTCC TCGCTCCCGG GCATGGCGGG GCTCATGCCC TACTGGTACA ATTTCGCCCT CATGTTCGAG GCTCTGTTCA TCCTCACCAC CGTGGACACC GGCACCCGCG TGGCCCGTTT CCTCCTCCAG GAGCTGGGGA GCCGGGTCTA CGCTCCCCTG GGGCAACCCC GCTGGCTGCC GGGTATCATC GCCACGAGCC TGATGGTGGT GGTTGCCTGG TCGTACCTGA TCTGGTCCGG CAACGTCTCC ACCATCTGGC CCATGTTCGG GGTTTCCAAC CAGCTGCTGG CGGCGATCGC CCTGGGCATC GGCACCACGG TCCTGATCAA GGGGGGCAAG GTCCGATATG CCTGGACTAC GGCTCTGCCC ATGGCGTTCA TGTATGTCAC CACCTTTGCC GCCTCCTGGC AGCTGACCGG CTCATTCCTG CGCAAGGCGG CAACGGCCCC CACCGCGGCC GAGGCTCTCA CCTTCAGGAT CAACGGCGGG CTGGTGGCGG TCATGGCGAT CCTGGCGGTA GTGACCCTGG GCGACATGCT CCACAAGTGG TACGGATACC TCACCTCCAC CCGCCCGGTG GTCACGAGCG AGGTCCTGGA GTACGAAGAG GCGGCGTAA
|
Protein sequence | MLAKGFWLVV SLVAACSLAV VAGVVNPAEK VNALWLVTAA ACFYMVAYRF YGAFLAARVL SLDPALRTPA RRLADGMDFH PTNRWVLFGH HFAAIAGAGP LIGPMLAAQF GYLPGFLWIL IGSVLVGAVH DMVILGASVR RNGRSLAQIA KDEIGPVGGL AASLAILFIL IVALAGLGLA VVNSLAKSPW GTFTIFLTIP IALFMGLYLY KIRPGRVGEV SAIGFVLLLA AVFAGHYIPG SPIEPYFNLS KHGLVVAMAA YGFVASILPV WMLLCPRDYL STYMKIGTVL LLACGVIFMA PTLQMPPVTR FVSGGGPIIP GTLFPFMFIT IACGAISGFH SLISSGTTPK MITSEREIPM IGYGAMLAEG FVAVMALVAA TILIPGDYFA INTKLSFDAI AALGFPVERV RELSALVGTD VAGRPGGAVS LAVGMASILS SLPGMAGLMP YWYNFALMFE ALFILTTVDT GTRVARFLLQ ELGSRVYAPL GQPRWLPGII ATSLMVVVAW SYLIWSGNVS TIWPMFGVSN QLLAAIALGI GTTVLIKGGK VRYAWTTALP MAFMYVTTFA ASWQLTGSFL RKAATAPTAA EALTFRINGG LVAVMAILAV VTLGDMLHKW YGYLTSTRPV VTSEVLEYEE AA
|
| |