| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0541 |
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| Symbol | polA |
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| ID | 2685802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 572574 |
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| End bp | 575249 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637125207 |
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| Product | DNA polymerase I |
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| Protein accession | NP_951599 |
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| Protein GI | 39995648 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACCG ACACGCTGTT TCTCATCGAC GGCTCCTCGT ACATCTACCG GGCCTACTTC
GCCATCAGGC ATCTGTCGTC GCCCGCGGGT TTCCCCACCA ATGCGCTCTA CGGCTTCACC
CAGATGCTCC TCAAGGTCAT CAAGGATCAC CATCCCGGCC GCTTGGCCGT GGTCTTCGAC
AAGGGGCGCA CCACCTTCCG CACCGAGATC TACCCCGATT ACAAGGCGAA CCGGGCCGCC
ATGCCCGATG ATCTGGTTCC CCAGATCGGA CCCATCAAGG AGATGGTCCG GGCCTTCAGC
ATCCCGGTTC TGGAGTTGGA GGGCTACGAG GCCGACGACA TCATCGGCAC CATTGCCCGG
CGGTGCGAGG AGCAGGGTTT GGAGGCCGTG GTCGTCACCG GCGACAAGGA TCTGATGCAG
ATCGTGAGCG ACCGCATCCG GCTGCTCGAC ACCATGAAGG ACCGGGTGTC CGGCATCCCC
GAGGTGGTGG AGCGCTTCGG CGTCGGCCCC GGGCAGGTCA TCGACATACT GGGCCTGGCG
GGCGACACCT CCGACAACAT CCCCGGCGTC CCCGGCATCG GCGAAAAGAC CGCCACCAAG
CTGATCCAGG AGTTTGGCTC TCTGGACGCC CTGCTGGAGC GGGCCGGCGA GGTTAAGGGA
AAGACCGGCG AGCGCCTGCG CGAGTTCGCG GAGCAGGCCC GGCTTTCCCG GCGTCTCGCC
ACCATTGTCC GCGACGTGCC CCTGGACTTC GACCTCGACG CCTTTGCCGT GGCCCCCGCC
GACAATCGCC GATTGGCCGA ACTCTTCAAG GAATATGGGT TCACGACCCT CATGAAGGAG
CTGACCAGCG AGGCCACCCT GACCACCGAG CACTACCGCA CCATTTTCGC GGAGGCCGAT
TTCCGGGCCC TGCTCGCCGA CCTGGCCGGG GCCGGGGTCT TTTCGGTGGA CCTGGAAACC
ACGAGCCTCA ATCCTCTTGA GGCGGACATC GTGGGCATCT CCCTGTCGTT CCGGGATCAC
GAAGCCTGCT ACATCCCGGT GGGGCACGCC TATGACGGCG CCCCGGCCCA GCTCGACCGC
ACCCTGGTGC TGGAGGGGCT GCGGCCGCTC CTCACCGACC CCGCGGTGCG CAAGGTGGGG
CAGAACCTCA AGTACGACTA CCAGGTGCTG CGCCGTCACG GCATCGTCAT GGCCGGGGTC
TGGTGCGATA CCATGGTCGC CTCCTATCTG ATCAACCCGG TCCGGTCGGG CCACGGCCTG
GACTCCCTGG CGGTGGAGCA CCTGGACCAC CGGATGATCT CCTACGAGGA GGTGGCCGGG
AAGGGAAAGG ACCAGCTGAA CTTTGCCCGG GTGCCGGTGG AAAAGGCGTC CACCTATTCC
TGCGAGGATG CCGACGCCGC CTGGCTCCTG CACCGGCTGT TCCTGCCCCG GGTGGCCGAG
GCCGGCATGG AGCGCCTGTT CTTCGATCTG GAGATGCCGC TCGTACCGAT CCTGGCCGAG
ATGGAAACGG CCGGGGTCAA GCTGGACCTG GCGCTGCTGG GGGAACTCTC CGCCGGGCTC
GGCAGCCAGT TGACGGCTCT GGAGGAGCAG GTCATGGCGC TCGCGCCCGA GCCGTTCAAC
CTCAACTCGC CCAAGCAGCT GGGAGAGGTG CTGTTCGAGA AAATGAAGCT CCCAGCCGGG
AAAAAGACCA AGACCAAAAC CGGCTGGTCC ACCAACGTGG AGGAGCTGGA ACGGCTGGCC
GAGGCCGGGC ACGAGATCGC CGCGGCCATC CTCCGGTACC GGGGGCTCGC CAAGCTCAAG
TCCACCTACA CCGATGCCCT GCCCAGGCTG GTGCACCCGG CCAGCGGGAG GGTGCACACC
TCCTACAACC AGACCGTCAC CAACACCGGG CGGCTCTCGT CCTCGGAGCC CAACCTGCAG
AACATCCCGG TCCGCACCGA CGAGGGGCGG AAGATCCGGC GCGCCTTCAT CGCGGAGGAG
GGCCACCTGA TCCTCTCGGC CGACTACTCC CAGATCGAGC TGCGGGTCCT GGCCCATCTC
TCGGAGGACC GGGTCTTCTG CGACGCCTTT GCCCGGGACG AGGACATCCA CACCCGGACC
GCGGCCGAGG TGTTCGGCCT CTTCCCGGAG ATGGTGACGC CCGAGATGAG GCGCCAGGCC
AAGGCCATCA ACTTCGGGGT CATCTACGGA CAGGGGGCCT TCAGTCTGGC CAAGCAACTG
GGGATCACCA CCAAGGTGGC CAAGGAGTTC ATCGACAACT ACTTCGCCCG CCATCCTGGC
GCCCGGGCCT TCCTGGACGG CTGCGTGGCC GAGGCCGAGG CCAGGGGCTA CGTGACCACC
CTCATGGGGC GGCGGCTCCC CATTCCGGAC ATCGCCAGCA GCAACGGCAA CATCCGGGCC
TTTGCCCAGC GCAACGCCGT CAACTACCCC ATTCAGGGCT CGGCCGCGGA CATCATCAAG
GCGGCCATGG TGCGGGTCAC GGAGCGGATG CGGCGAGAGG GGCTCACCAG TCGCCTGATC
ATGCAGGTCC ACGACGAACT GGTCTTCGAG GTGCCGGAGG GCGAACGGAC CGCCATGGAG
CGGCTCGTGC AACACGAGAT GGAGCATGCT GCCCCCCTCC GGGTGCCGCT GCGGGCGGAC
GTGAACGTGG GGCGTAACTG GAGCGAGGCC CACTGA
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| Protein sequence | MATDTLFLID GSSYIYRAYF AIRHLSSPAG FPTNALYGFT QMLLKVIKDH HPGRLAVVFD
KGRTTFRTEI YPDYKANRAA MPDDLVPQIG PIKEMVRAFS IPVLELEGYE ADDIIGTIAR
RCEEQGLEAV VVTGDKDLMQ IVSDRIRLLD TMKDRVSGIP EVVERFGVGP GQVIDILGLA
GDTSDNIPGV PGIGEKTATK LIQEFGSLDA LLERAGEVKG KTGERLREFA EQARLSRRLA
TIVRDVPLDF DLDAFAVAPA DNRRLAELFK EYGFTTLMKE LTSEATLTTE HYRTIFAEAD
FRALLADLAG AGVFSVDLET TSLNPLEADI VGISLSFRDH EACYIPVGHA YDGAPAQLDR
TLVLEGLRPL LTDPAVRKVG QNLKYDYQVL RRHGIVMAGV WCDTMVASYL INPVRSGHGL
DSLAVEHLDH RMISYEEVAG KGKDQLNFAR VPVEKASTYS CEDADAAWLL HRLFLPRVAE
AGMERLFFDL EMPLVPILAE METAGVKLDL ALLGELSAGL GSQLTALEEQ VMALAPEPFN
LNSPKQLGEV LFEKMKLPAG KKTKTKTGWS TNVEELERLA EAGHEIAAAI LRYRGLAKLK
STYTDALPRL VHPASGRVHT SYNQTVTNTG RLSSSEPNLQ NIPVRTDEGR KIRRAFIAEE
GHLILSADYS QIELRVLAHL SEDRVFCDAF ARDEDIHTRT AAEVFGLFPE MVTPEMRRQA
KAINFGVIYG QGAFSLAKQL GITTKVAKEF IDNYFARHPG ARAFLDGCVA EAEARGYVTT
LMGRRLPIPD IASSNGNIRA FAQRNAVNYP IQGSAADIIK AAMVRVTERM RREGLTSRLI
MQVHDELVFE VPEGERTAME RLVQHEMEHA APLRVPLRAD VNVGRNWSEA H
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