| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0501 |
|---|
| Symbol | |
|---|
| ID | 2686049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 534968 |
|---|
| End bp | 535732 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637125167 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | NP_951559 |
|---|
| Protein GI | 39995608 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGT CCAGGCTCTG CTCCCTCTAC CCGACCCTGC TTATCCCGCT GCTCTTTGTG
GCCGGCTGCG GGCTTTTCGC CTCTTCTACG GCTCCGGTGA GCCGCAGCCC CGAGTCCATG
GCCCGGGAGG CTGAGGAGTT TCAGAGTTCC CGTCGATTCG AGGACGCCAT AGCCCAGTGG
CGCAAGGTGA AGGAAAGTTA CATTTCCCCT GAACTGATAA CCCTCGCCGA GATCAAGATC
GCCGACGCCC AGTTCGACAG CGGCAACTAC ATTGAAGCTG CCGCATCCTA CGAAGAGTTC
CGCAAACTTC ATCCCAACCA CGAGAAGTCG GCTTATGCAC TTTACCGCCA AGGCCTGAGC
TATTTCAACC AGATCCACGG ATTCGACACC GACCAGACCC CCGTATCCAA CACGGTAACC
ATTTTCGAGT CGTTTTTGCG CCTCTATCCC CAGTCCGAGC ATGCGGAAGA GGTGCGCAAC
AAGCTTGACG CGGCGCGCCA GAACCAGGTC CAGTACGAGA TTTACGTGGG ACAGTTCTAT
TACCGTACCG AAAAGTACAC CTCCGCCATC AAGCGGCTGG AGGATGCCCT CAAGCGCTAT
CCCCGTTCTC CGCTCCACGA CGAGACCCTC TACTACCTGG GCAAGGCCTA TATCAAAGCT
GGCGACAAAG CCGGCGGACG TGAGGCGTTC CAGCGGCTTT TCAATGAGTT CCGCACGAGT
AAGTACGTGG ACGAAGCCCG CTCGTTCCTG GACAAGAACT TCTGA
|
|---|
| Protein sequence | MNVSRLCSLY PTLLIPLLFV AGCGLFASST APVSRSPESM AREAEEFQSS RRFEDAIAQW
RKVKESYISP ELITLAEIKI ADAQFDSGNY IEAAASYEEF RKLHPNHEKS AYALYRQGLS
YFNQIHGFDT DQTPVSNTVT IFESFLRLYP QSEHAEEVRN KLDAARQNQV QYEIYVGQFY
YRTEKYTSAI KRLEDALKRY PRSPLHDETL YYLGKAYIKA GDKAGGREAF QRLFNEFRTS
KYVDEARSFL DKNF
|
|---|
| |