| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0446 |
|---|
| Symbol | |
|---|
| ID | 2686240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 477066 |
|---|
| End bp | 477848 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637125112 |
|---|
| Product | 16S ribosomal RNA methyltransferase RsmE |
|---|
| Protein accession | NP_951505 |
|---|
| Protein GI | 39995554 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGGT TTATCGTCAC GGGCCTTGAT CTGTCGGGTA AAAACGTGGT TGTGCGGGGG
GACCTTTTTC GTCACATGGC CCGGTCGCTT CGTCTAAAAA TTGACACCGA GGTCATTCTC
GCGGATGGGA AAGAGGCCGA GTGCACGGGA GTCATCACGG CCATGGGACG AGACAGCCTG
ACGGTGACCA TCAGCGAGCG GCGGCAGATC AGGGGGGATG GAGACGGCCT CTGGCTCACC
CTCTGCCAGG GTCTGCCCAA AGGCGACAAA ATGGAACTCA TCTTGCAGAA ATCCACTGAA
CTCGGCGTAT CCGAAGTGGT TCCCTTCCTG GCCGAGCGCT CGGTCCCCCG CATTTCGCCG
GAGCGGGAGC AGGAGCGGTT ACGGCGCTGG CAACGGGTGG CCGAAGAGGC AGCCCGCCAG
GCTGGATGTC CAGCAGTACC CCGGGTACAA CTGGCGCGGG GGCTGACCGA GGCGGTTCGG
GGAACGGACC ACGACCTGAA GCTTCTGCTC TGGGAGGACG AACGGACCAC GACCCTCGCC
GGAGTCCTGG CCGCAGCGCA GACACCGAAA CGCATCGCCG TGGTGGTGGG CCCCGAGGGG
GGATTCACGG CGGCCGAGGC AGCCGAGGCC CGGGAGGCGG GATTCGTTCC CGTCACCCTC
GGCCGTCGGA TTCTCAGAAC CGAAACCGCC GGCATCGCCC TGGTGGCGAT ACTGCAATAC
CTGTACGGAG ACCTGGGCAG CGGGCCGCAT CCCCGCCCCG CCCCGGCGCA ACCGATACCA
TAG
|
|---|
| Protein sequence | MRRFIVTGLD LSGKNVVVRG DLFRHMARSL RLKIDTEVIL ADGKEAECTG VITAMGRDSL
TVTISERRQI RGDGDGLWLT LCQGLPKGDK MELILQKSTE LGVSEVVPFL AERSVPRISP
EREQERLRRW QRVAEEAARQ AGCPAVPRVQ LARGLTEAVR GTDHDLKLLL WEDERTTTLA
GVLAAAQTPK RIAVVVGPEG GFTAAEAAEA REAGFVPVTL GRRILRTETA GIALVAILQY
LYGDLGSGPH PRPAPAQPIP
|
|---|
| |