Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0357 |
Symbol | |
ID | 2686503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 387351 |
End bp | 388952 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637125022 |
Product | cytochrome c family protein |
Protein accession | NP_951416 |
Protein GI | 39995465 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.412865 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGAAGA AACGACTGGC TGTACTGGCG GTGGCCGCGG GAGCGGCAGT TGCCCTGTCG ATCCCGGCAC TCTCCACGGC GGCAAAGGGC AAGCCTGCTG CCACGGGTGC CAAGGGTGAC GGACGGGAGA CATGCTACGG CTGTCACGAG GAGGTCAAGG CCCTCAAGGA AGGATCAAAG CACGCCCGTC TTGCCTGCGA TTCCTGCCAC GACAAACTCA AGGAGCACCT GGCCAACTAC GAGACCAAGC CGGGCACCAA TCTGGATCCG GCCAAGTGCG GTTCGTGCCA CAAAAATGAA TACAGCAGTT TCTTCACGGT CAACTACGAC GCCCAACCGC GCAAGGAGAA AGGGATTCCC ACCGGGCGCT CCCCCATGCA GGACAAGCTC CTGGCCGGCC ACGGTTTCAC CTTCGAGCAC AACGAACCCC GGGGACACGC CTTCATGGTG GTTGACCAAT TCATCGTCGA CCGTTTCCAG GGAGGGCGTT TTCAGTACAA GAAGGGCGCC TGGGGAATGG ACGCCACCGG CAAGGCATGG GACATCCTGA CCGACACGGG CAAGAAGCTA CCGGAAACGG CCATGGCGGG AAATCCCACC TGTATCCAGT GCAAGACGTC CGATCACATC CTCAAATGGA AGTTTATGGG GGACAAGGAC CCCAAGGCCA CGTGGGACCG GAGTTCCGAC ATCGTTGCAG TGGCCAAGGA CACCCAGAAT CCGGTGGGGT GCATCCACTG TCACGACCCC CATGGCACCC AACCCCGCGT GGTGCGTGAC GGCCTGATCC AGGCAATTGA GAAGGACCCG ACCGCCAATA TTTTCGCCAA GAACGGCAAG ACCGACCTGA AAGTTATCTC TTTCCGCGAC GGTTTCCGCA AGATCGGCGT CATGGAAAAG ACCGATTCCC GGCTCATGTG CGCCCAGTGC CACGTTGAGT ACAACTGCAA CGCGGGCTCC CAGTGGTCAG ACGGCCAGAA AGTGGGCTAC GACGACCAGC GCACCAACCA CTTCCCCCTC AAAAATGCAA AGGATCTCCT CGCACACTAC AAGAAGCTCG ATTTCTACGA TTTCAAGCAC GCGATCACAG GGGCACGCCT CGTCAAGCTG CAGCACCCGG AAGCCGAAAC CTACGCGGGC AGTGTCCATG ACCGGGCCGG CGTCGGCTGC GCCGACTGCC ACATGCCGCG CATGAAGGGC AAAGACGGCA AGATGTTTAA ATCCCACGGC GTGATTCGTC CCGCTCACCA TGTGAAAGAA GCCTGTCTCG GCTGCCATCC CAAGAGCACC GTGGAGCAGA AGTCCTACCA GATCGAGGGA ACCCGTAACT ACATCCGCGG CAAGATGCGC AAGGCGGAAT ACTGGCTCGG CCAACTGATC GACACCTACG CCGCCGCCAA GCGGATGGGA ATCGGTGAAG ATGTCCTGGC CAAGGCACGG GAGAAGCATG AGGAAGCCCA TGTACTGTGG GAGTACTGGA CCGCTGAAAA CAGCGACGGT TTCCACAATC CCGAACTGGC CCGCGACAGC CTGACCTCCT CCATCGCGGC ATCCAAGGCA GGGGTTAAGC TCCTGAACGA CGCCATGGAA CCCAAGAAGT AA
|
Protein sequence | MWKKRLAVLA VAAGAAVALS IPALSTAAKG KPAATGAKGD GRETCYGCHE EVKALKEGSK HARLACDSCH DKLKEHLANY ETKPGTNLDP AKCGSCHKNE YSSFFTVNYD AQPRKEKGIP TGRSPMQDKL LAGHGFTFEH NEPRGHAFMV VDQFIVDRFQ GGRFQYKKGA WGMDATGKAW DILTDTGKKL PETAMAGNPT CIQCKTSDHI LKWKFMGDKD PKATWDRSSD IVAVAKDTQN PVGCIHCHDP HGTQPRVVRD GLIQAIEKDP TANIFAKNGK TDLKVISFRD GFRKIGVMEK TDSRLMCAQC HVEYNCNAGS QWSDGQKVGY DDQRTNHFPL KNAKDLLAHY KKLDFYDFKH AITGARLVKL QHPEAETYAG SVHDRAGVGC ADCHMPRMKG KDGKMFKSHG VIRPAHHVKE ACLGCHPKST VEQKSYQIEG TRNYIRGKMR KAEYWLGQLI DTYAAAKRMG IGEDVLAKAR EKHEEAHVLW EYWTAENSDG FHNPELARDS LTSSIAASKA GVKLLNDAME PKK
|
| |