| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0328 |
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| Symbol | gspE |
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| ID | 2686832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 356895 |
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| End bp | 358439 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637124994 |
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| Product | general secretion pathway protein E |
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| Protein accession | NP_951388 |
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| Protein GI | 39995437 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAGA TCGCCCGGCG GCTCGGCATC CCCTTCCTGG CCGAGATCGG GGACAATGAG
GCGGATGCGG CACTGCTCGC GCGGCTGCCC CTGGCTTTTG CCCGGGGCAG GCTCGTCCTT
CCCCTGCGGG AGCGGGATGG GCGGCTCCTG GTTGTTTCAG GCAATCCCGC GGATCTGTCG
GCCATCGATG AGGTGCGGGG AGTCTACGGG ATGGAGGTGG AACTGGCCGC GGCAACGCCG
GATACGGTGC TCGGCGCGGT GAACCATCTC TACGCCCGGC TCGGCAGCTC GGCCCAGGAG
GTCGTGGAAG AGCTTGAAGG GGAAGACCTT TCGGTCATCG CCACTGAGCT GGCCGAGCCC
AAGGATCTTC TGGACCTGAC CGACGAAGCG CCGGTCATCC GGCTTCTGAA CTCGATCCTC
TCGGAGGCGG TGAAGGAGCG GGCCAGCGAC ATCCACATCG AACCCTACGA GCGGGAACTG
GAGGTTCGTT TCAGGATCGA CGGCATCCTC TACCGCAAGC TCGCCCCTCC CAAGGTGGTG
CAGGAAGCTC TGGTCTCCCG CGTGAAGATC ATGGCCGGGT TGAACATCGC CGAAAAGCGC
CTTCCCCAGG ATGGCCGCAT CAGGGTAATC GTAGCGGGAC GGGATGTGGA CATCCGTGTC
TCCATCATCC CTACCTTCTT CGGCGAACGC GTGGTGCTCC GTCTCCTGGA CAAACAGAAG
GGGCTCATTT CTCTCGAAAA CATCGGGCTG TCCGAAGGAG GCGTCCGCTC CATGGAGCGC
CTCCTCGGCC GGACCAGCGG CATCATCCTC GTCACCGGGC CAACGGGAAG CGGCAAGTCC
ACCACCCTCT ACGCGGCACT CAACCGGCTC AACTCGCCGG AAAAGAACAT CATCACCATC
GAAGACCCCA TCGAATATCA AGTCAAGGGG ATCGGCCAGA TTCAGGTCAA TCCCAAGATC
GAGCTGACCT TTGCCCAGGG CCTGCGCGCC ATTCTCCGCC AGGACCCGGA CATCGTAATG
GTGGGAGAGA TCCGCGACGC CGAGACGGCG GAAATCGCCA TGCAGGCGTC ACTCACGGGG
CACCTGGTCC TCTCTACCCT TCACACCAAC GACAGTGCCA CCGCCATCGC CCGACTCGTC
GACATGGGAA TCGAACCGTT CATGGTGGCA TCGTCCCTGT CCGCTGTTCT GGCCCAGCGG
CTCGTGCGCC GCATCTGCCC CCACTGCCGC GAATCCTACA CGCCGGAACG GGACTACGCC
GGCATCACCC TCCCCTCAAC CCTCTACCGG GGGCGGGGAT GCGATGCATG CTTCGGCCTC
GGGACCCTGG GCCGGGTCGG CATCTACGAA CTCCTACCCG TGGACGGGGA GATCTGCTCC
ATGATCATCC GTCGGGAACC GGCCGGAGCC ATCAAGGAAT ACGCTGTCGG CAAGGGGATG
CGGACCCTGC GCGACGACGG CCTGGCCAAG GCCGCAGCGG GCATCACAAC CATCGAGGAG
GTCCTGCGGG TAACGCAGGA GGAGTATGCC GACCTTCCGG TATAG
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| Protein sequence | MEQIARRLGI PFLAEIGDNE ADAALLARLP LAFARGRLVL PLRERDGRLL VVSGNPADLS
AIDEVRGVYG MEVELAAATP DTVLGAVNHL YARLGSSAQE VVEELEGEDL SVIATELAEP
KDLLDLTDEA PVIRLLNSIL SEAVKERASD IHIEPYEREL EVRFRIDGIL YRKLAPPKVV
QEALVSRVKI MAGLNIAEKR LPQDGRIRVI VAGRDVDIRV SIIPTFFGER VVLRLLDKQK
GLISLENIGL SEGGVRSMER LLGRTSGIIL VTGPTGSGKS TTLYAALNRL NSPEKNIITI
EDPIEYQVKG IGQIQVNPKI ELTFAQGLRA ILRQDPDIVM VGEIRDAETA EIAMQASLTG
HLVLSTLHTN DSATAIARLV DMGIEPFMVA SSLSAVLAQR LVRRICPHCR ESYTPERDYA
GITLPSTLYR GRGCDACFGL GTLGRVGIYE LLPVDGEICS MIIRREPAGA IKEYAVGKGM
RTLRDDGLAK AAAGITTIEE VLRVTQEEYA DLPV
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