Gene GSU0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU0288 
Symbol 
ID2685300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand- 
Start bp318413 
End bp319033 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID637124954 
ProductHEAT repeat-containing PBS lyase 
Protein accessionNP_951348 
Protein GI39995397 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.0316952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCAGTT GTTCCAACTC TGGTACTAAT GCCCCTGACA TGAAGGCACA GGTTTCAATG 
ACACGACGCG AAGAACTTAT TGCTCTCCTG AAGGACCCCG CCGAAGAGGT TCGCGAAGCG 
GCGGCCAGGG CCATCGAGCG GATCGAGGGT GCAGGCAGCT TTGCCGAGGT TATCGAGCAG 
CTGAAAAAAG GGAATCGCGG CGCCAAGATA CGAGCCATCT ATGCCCTGGG AAGGATCGGG 
GGCGAACGAG TGCTTACTCC TCTCATGTAC TGCGCCATGC GACCGGAGGA GGACATCCGG 
ATCGCCGCCA TCGACGTCCT CGGCACCCTG GCCACCCCCC AGGCCTTCCC TCTGCTCGCC 
GAATGCCTGC GCGAGCCGTC GGCTGCGGTT CAGGCCAAAG CCATCGAGGC TCTGGGCAGG 
TACCGGACCA CGGAGGCCAT TCGCCTTATC CTGCCGTTCC TTGACGCCCG GGACGGCTTC 
CTCGATGCCG AGGCGGCCCG AGCGGTCGGC AACATCGGCT CAGCAGACCA TGAGGGGAAA 
CTCCTCGCGC TCCTCTCCTC CCCCCATCCG GCGACCCGTG CAGCAGCGGC CGAAGCCTTG 
GGCACCCTCC CCTTCGAGTG A
 
Protein sequence
MLSCSNSGTN APDMKAQVSM TRREELIALL KDPAEEVREA AARAIERIEG AGSFAEVIEQ 
LKKGNRGAKI RAIYALGRIG GERVLTPLMY CAMRPEEDIR IAAIDVLGTL ATPQAFPLLA 
ECLREPSAAV QAKAIEALGR YRTTEAIRLI LPFLDARDGF LDAEAARAVG NIGSADHEGK 
LLALLSSPHP ATRAAAAEAL GTLPFE