| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0276 |
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| Symbol | |
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| ID | 2686940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 285252 |
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| End bp | 286424 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637124942 |
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| Product | HlyD family secretion protein |
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| Protein accession | NP_951337 |
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| Protein GI | 39995386 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0227266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACG CCATGGAACA GACATCGGCC AAGCCGGTCC GCTCAGTGCT GCTGTGGGCC
TTCGTCGTTG CCTTCATTCT CTTTTTCATC TGGGCGTACG TTTATCGTGT CGACCAGACG
ACCCGCGGGA TCGGCTCGGT CATTTCCAGC AGCCGGGTCC AGGTCATTCA GGCAGTGGAC
GGGGGAGTGC TCCAGTCTCT GAAGGTAAAG GAAGGTGACC GGGTCAGGCG CGGACAGGTA
GTGGCCTTGC TTGACCAGAC CCGCTCCGGA GCTTCGGTCA GAGAGCTCGA CGCCCGGCTG
GCGGCGATGA AGGCCCAATC GGCCAGACTC CGGGCCGAGG TGCTGGGCTC TCCGTCGGTC
GCATTTCCTC CCGAATTGCG CGGCTTCCCG GAGCTGGTCA AGGTACAGCA GGCACTGTTC
GATCAGCGAC GCCAGAGCCT CCGCGAAGAG TTGCGGACCC TTGACGTCGC GGTAAAACTT
GCGCGGGAGG ACGCCCACCT GGTGGCGCAG TTGGCCAAGA CCGGCGACGT GAGCCGCTCA
GAGGTGATCA GGAGCGAACG GGCATTGAAC GATGCCGAGG CACAGCTGAT CAACCGGAAA
AACAAATACT ACCAGGATGC AAGCGCCGAG TTGGCAAAGA TTGAGGACGA GATCAACCAG
AACGAACAGG TGAGGACTCA ACGCAACCAG CAACTGTTCG ACAGTGTCAT GAAAACTCCC
GTCGACGGAA TCGTAAAAAA TGTCCGCGTC ACGACCCAAG GGGGCGTGCT CCGCTCCGGC
GAGGAGCTCA TGCAGATCGT CCCACTTGAC GACAAGCTGA TCATCGAAAC CAAGGTGAAG
CCGTCCGATA TCGCCCAGAT CCGACCGGGC CTGCCCGCAG CAATCAGGTT CGACGCCTTC
GACTATACCA TCCATGGTGC GGTCGACGGT ACGGTCGCCT ATGTCAGCGC AGACACCATC
AAGGAGGAGT CCAAAGCGGG CGAGCAGACC TATTACCGGG TCCATGTCGA GATAGCCGGC
AGCAATCCGG TCAGGACGAG AACCGGTAAG CAGCTGGACA TCATACCCGG CATGACGGCC
CAGGTGGATA TCCGTACCGG CAGCCGGACC GTGCTTGACT ACCTGCTCAA ACCACTGCGC
AAGACCATGA CCGAATCGAT GGGCGAGCGC TGA
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| Protein sequence | MNDAMEQTSA KPVRSVLLWA FVVAFILFFI WAYVYRVDQT TRGIGSVISS SRVQVIQAVD
GGVLQSLKVK EGDRVRRGQV VALLDQTRSG ASVRELDARL AAMKAQSARL RAEVLGSPSV
AFPPELRGFP ELVKVQQALF DQRRQSLREE LRTLDVAVKL AREDAHLVAQ LAKTGDVSRS
EVIRSERALN DAEAQLINRK NKYYQDASAE LAKIEDEINQ NEQVRTQRNQ QLFDSVMKTP
VDGIVKNVRV TTQGGVLRSG EELMQIVPLD DKLIIETKVK PSDIAQIRPG LPAAIRFDAF
DYTIHGAVDG TVAYVSADTI KEESKAGEQT YYRVHVEIAG SNPVRTRTGK QLDIIPGMTA
QVDIRTGSRT VLDYLLKPLR KTMTESMGER
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