Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0144 |
Symbol | |
ID | 2687162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 158787 |
End bp | 160916 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637124811 |
Product | sensory box histidine kinase |
Protein accession | NP_951206 |
Protein GI | 39995255 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCTTAC GCAACGACAG GGTGTATCTG ATTGTTGTCA GTGTTTCGGC GCTCCTGGTG CTTGGCGTGC TTGCGGCGTC CTTTGTCGTC TACCGTCGCC ACGATTTTCC CCTCCTCGAC TTCCTTACCC TGGTTCTTTT CCTGCTCGTT TCCTGCATCA TTTTCATGGT GGTCAGCTAC CGCAAGACAC GCAGCGTCAA TGAACTGGCC CATTTGCACG AGCTTATGCA GTACCAGCGG GAGCTGGACA AGATCGCCCG GCGCTACCGG AGTCTTCTGG AAGGGGCCGG CAATGCGGTC TTCGTCTTCA ATGCCGACAC GGGGCTTCTG GTGGAGGTGA ACCGTCGGGG CACCGAACTG CTGGGGTACA GCAAGGAGGA AATGGTCACT CTCAAGGGGA AGGACCTGGT GCCCGAGGAG GACCAGGAGA AGTTTTCCCT GCTGGTATTG AGGGTGGTCC GGCGCGGAAG GGGCCGGACC GACGGAATTG CGTTCCGCCG CCGGGGAGGG GATCGCTTCC TGGGGGAGGT GGAAGCCCGC CTCATTGATC TGGGCGACGA GAAGGTGGTC CATGCCACGA TCAGGGACAT CACATTCAAG CACCGGGCCG AGCGGGAGAT GCGCCAGCGC AACCGGGAGC TCGCCTCCCT GGTGAACATC ATCACCAGAG CCAACCAGGA GATGGAGCTG GAGACGGTCC TCGACGTAAC CCTGCGGGAA ACGATCGAAG TCTTCGGCGT TGACGGCGGC GGCATCCATC TGCGCGAGCG GGACGGCACC CTGCGCCCGG CAGCTACCTG TTTCGTTCCG GATCGGCTCA GGGAGGCGCT TGATGCCGGA GCCGACGGCG GACTGTTGGG CAGGGTTGCC GCCACGCGCG GCCCTTTCGC CCTGGACGAT CTGGCCATGG AAGGGTGCAT GGCGGGGCTC TCGGATGAGT CGGCAGGCTG GAAGGGGTTT GCGGCGGTCC CGCTGTTCGC CAAGAACCGG GTCACCGGCG TCATGTACCT GTTGAACCGG CAGATGCGTT CCTTCACCGA CGAAGAGCTC AAGCTGTTCT TTTCCATAGC CGGCCAGATG GGCATCATCA TCGAAAACGC CCGCCTCTTC AATGAACTCA AGTGGAAAAG CGATGAGCTC ATGGGGTCGT TCCGCCTCCT GGAGAAAAGC AGTCACGAGC TTGCCCTTTC CCAGCACCGG CTCCGCACCA ATCTGACCCT CGTGGAACGC GCCAATCAGG AGCTGGAGCG AATCGACCGG ATGAAGAACA ACTTTCTCGG CATGATTTCC CATGAGTTTC GCACCCCCCT TACCAGCGTC ATCAGCGGCA CCGATTTTCT GCGCTCCTCG TCAAGCCTAG CCGGCGACCC CGACAGCCGG CAGGTCCTCG ACATGATCCA CGAGGGGGGA GAGCGCCTTT TCGAGATCGT CAACGATATC CTCAAGGTTG CCCGTCTTGA GGCCAAGTCG GCCACTGTGG CCCGGCGTGC CCTCCACATC TCCCAGGTGT TCAGCCAGGT GGTGACGAAG CTTGAGCCGC TGCTTGCGGA GCGGAGCCTG CGAATCGTCT TCAACAACCT GGAGGGGCTC CCCCACTGCA TAGGCGACCA GGAGTGCTTC GAGGAGATAT TCTCGGAACT GCTGGAAAAC TCGGTCAAGT TCACTCCGGA CGGGGGGACG ATCATCATCT CGGCGCGGGT GGTCGACCGG CGGGCCCTTG CCCCGAAGCG GGAGATCCTG GCGCGCTTCA ATGCCGATTT CCCGAGCCAG ATCGGGGATC GCTGCTATCT GGAGGTGGCG GTCCGCGACA ACGGCATCGG GGTCAGCCAC GACGAGCAGG TGAAGATATT CGACAAATTC TACGAAATTG GCGATATCCG TCACCACTCC AGCGGCAAGT TCAAGTTCCA GGGAAAGGGG ACGGGGCTTG GACTGGCCAT CGTCAAGGGG ATGGTGGAGG CCCATGGGGG CATGGTCTGG GTCGAGAGCC CGGGGGTTGA TCCGGAGGCC CGCTTCGGCA GCGCGTTTCT GGTTCTCCTT CCCCTTGAGG AGAGTCTGCG GACGCCGGTC ATCCCTCTGG CCGCCCCCCG GGATCCCCTG GCGGGAGACA TCCCCGGAGA GGGAGCGTGA
|
Protein sequence | MSLRNDRVYL IVVSVSALLV LGVLAASFVV YRRHDFPLLD FLTLVLFLLV SCIIFMVVSY RKTRSVNELA HLHELMQYQR ELDKIARRYR SLLEGAGNAV FVFNADTGLL VEVNRRGTEL LGYSKEEMVT LKGKDLVPEE DQEKFSLLVL RVVRRGRGRT DGIAFRRRGG DRFLGEVEAR LIDLGDEKVV HATIRDITFK HRAEREMRQR NRELASLVNI ITRANQEMEL ETVLDVTLRE TIEVFGVDGG GIHLRERDGT LRPAATCFVP DRLREALDAG ADGGLLGRVA ATRGPFALDD LAMEGCMAGL SDESAGWKGF AAVPLFAKNR VTGVMYLLNR QMRSFTDEEL KLFFSIAGQM GIIIENARLF NELKWKSDEL MGSFRLLEKS SHELALSQHR LRTNLTLVER ANQELERIDR MKNNFLGMIS HEFRTPLTSV ISGTDFLRSS SSLAGDPDSR QVLDMIHEGG ERLFEIVNDI LKVARLEAKS ATVARRALHI SQVFSQVVTK LEPLLAERSL RIVFNNLEGL PHCIGDQECF EEIFSELLEN SVKFTPDGGT IIISARVVDR RALAPKREIL ARFNADFPSQ IGDRCYLEVA VRDNGIGVSH DEQVKIFDKF YEIGDIRHHS SGKFKFQGKG TGLGLAIVKG MVEAHGGMVW VESPGVDPEA RFGSAFLVLL PLEESLRTPV IPLAAPRDPL AGDIPGEGA
|
| |