| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0084 |
|---|
| Symbol | |
|---|
| ID | 2688160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 95499 |
|---|
| End bp | 96674 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637124750 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_951146 |
|---|
| Protein GI | 39995195 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.928121 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTC CCATTTCCGA TCAGATCCGG TCAGTCCAGT GCGCGCCCAT CGCCGAGGTT
AAGAGCTGGC TCGCTCACCG GGAGCCCGAT CCGGAGCGCC CGCTGGTGGA TCTGTGCCAG
GCCGTGCCCG ACTATCCGCC GGCCCGTCAG CTGACCGACT ACCTGGCGGC GCTCCTGGAC
GATCCGCTGG TGTCGAAATA CTCGCCCGAC GAGGGGCTCC CCGAGGTGCG GGAGGGGGTG
TGCGCCCGCT ACGGCCGGGT CTACGGCGCG GCCATGAATC CGGATCAGCT TTGCCTCACC
ATCGGCGCCA GCCAGGCGTT CTGGCTCGCC ATGGTTACCC TCTGCCGCGC CGGGGACGAG
GTGATCGTCC CGCTCCCCGC CTACTTCGAC CATCCCATGG CCCTGGATAT TCTGGGCGTC
AGGCCGGTCT ACCTCCCCTT TGACGAGGAA CGGGGCGGGG TGCCTGACCC GGCCGCGGTG
GAGCGTCTCA TCACCCCGCG CACCAGGGCC ATTCTGCTGG TGACCCCTTC CAACCCCACC
GGCGTGGTCA CTCCACCGGA AACGATCCAG GAACTCCACG GGGTGGCCCG GCGCCGGGGC
ATCGCGCTGG TCCTCGACGA AACCTATGCC GACTTCATCC CCGGCGGCGA GCGGCCCCAC
GATCTTTTCC TTGACCCCCG CTGGGGTGAC CACCTGATCC ACCTGATGTC CTTCGGCAAG
ACCTATGCCC TCACGGGGTA CCGGGCCGGC TGTCTCGCCG CGTCGAAAGA GTTCATCGGC
CACGCCCTTA AGGCCCAGGA CACCATGGCG GTTTGCCAGC CGCGCATCAC CCAGTATGCC
GTGCTCTACG GGGTCAGTCA CCTGGACGGC TGGGTGGAAG AGAACCGGCT CATGATGACC
CGACGGCACG ACCTCTTCCG GTCGCTCTTT ACCCGTCCCG GCAATCCGTT CAGCCTTGTG
GCGAGCGGCA CCTTCTTCGC CTGGGTGCGG CATCCCCTGC AGGAGGGCAC CGGCCGTGAG
GCTGCCCGCA GGCTGGCCGT GGAAGCCGGC ATCATCTGTC TCCCCGGCGA AGTATTCGGC
CCCGGCCTCG AACCCTACCT CCGCCTCGCC TTCGGCAACA TCCGCGACGA AGCCATCCCC
GGGGCGGTGG AGCGATTCCG AGCGTTTGCC CTCTGA
|
|---|
| Protein sequence | MKFPISDQIR SVQCAPIAEV KSWLAHREPD PERPLVDLCQ AVPDYPPARQ LTDYLAALLD
DPLVSKYSPD EGLPEVREGV CARYGRVYGA AMNPDQLCLT IGASQAFWLA MVTLCRAGDE
VIVPLPAYFD HPMALDILGV RPVYLPFDEE RGGVPDPAAV ERLITPRTRA ILLVTPSNPT
GVVTPPETIQ ELHGVARRRG IALVLDETYA DFIPGGERPH DLFLDPRWGD HLIHLMSFGK
TYALTGYRAG CLAASKEFIG HALKAQDTMA VCQPRITQYA VLYGVSHLDG WVEENRLMMT
RRHDLFRSLF TRPGNPFSLV ASGTFFAWVR HPLQEGTGRE AARRLAVEAG IICLPGEVFG
PGLEPYLRLA FGNIRDEAIP GAVERFRAFA L
|
|---|
| |