| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0044 |
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| Symbol | |
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| ID | 2688565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 53925 |
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| End bp | 60278 |
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| Gene Length | 6354 bp |
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| Protein Length | 2117 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637124709 |
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| Product | hypothetical protein |
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| Protein accession | NP_951106 |
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| Protein GI | 39995155 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTGTG AGGCGTATAA ATATATTCGG GCCACTATAA TCGGGCTGGT GTATTTAATG
GCCATATTTT GCGTCTCTGT AATTTTTGAC TCATCTGTGT GGGCAGGCAA TATTTTCAGT
TACTTTTACC AATCAAATTT ATTTACTTGC ACTTATTATT ACGACTATAA AGTAGAACAT
CCATCCGGAG TACACGGTTT TGCCCCGCGG TTGTCCCTTT CCTACAACAG CTTCCTTGTT
GGCAACACCA ACAACCAGTT AGGCACTGGC TGGGAAATTC CTTCCAACCA CATCCAGAAA
AACAGCAACG ACACATACTC CCTCATCCTG AACGGCGCCA GGCATGACTT GGTTGATGCC
GGGAACGGCC GCTACCGCAC CAGAATCGAA TCGTACCTGA AGATCGAGAA GAAACCCTGC
GCTGCAAACA GTTCCGGCGA AGCTTGGGAG GTGACTGCCA AGGACGGCAC CAGATATTCC
TTCGGCATCA CGCAGGATGC GGACAACATT CTCTACCCCG GCATTCCGGA GACCCCCCAG
GGGTGGCGCT GGAGCCTGGA CAGGATCACC GACACGAACG GCAACGCCAT CTATTATTCC
TACGTGGAAG ACCAGGGAGT CGTCTATCCC GGCAGGATCG AATACAACAA CGACCGGCAG
CGGGTCATTG AATTTACTTG GGAAGACCGG CCCGACCCGG TTTCGCTGGT GGATGAAGGC
TCCGCAGTCA CCATCGCTAA ACGGTTGAGC AGGATCGACG TCTCGGTCAG CGGCAGCCTG
GTGAAGAGTA TCAGGCTGGC ATATTCCCCC ATAACCCCGG AAACGCCGCT ATCGCTCCTT
TCCAGCATCA CCAAATACGG CTCTGATGGC GTCACCTCAC TGCCGCCGAC CCGGTTCACC
TACACACAGG CCGATGCCCA GACCAGGTTG CTGGAGACGA TCACCAGTGA CCTGGGGGGT
GTTACCACTA TTGCCTATGC CCCTTCCTCC ACCTGCCCGA ACAGCAGCCT CCCCTCCAAC
TACTGGGTGG TGTCATCGGT GACTAGGGAC AATGGCTTGC CGGCCGGCAA CTCCCAGAGG
ACCATTGTGA CCACCGGTTA TGCCTGTGCG AACGGGCTGT TCGACGTTCC TTCCAACGAA
TTTCGCGGCT TCGGCATGGT GACGGAAACC CATCGGGATG GCACGAACAT AATCTCGCAA
GTCATCCATA CCTTCAACCA GGACGATGCC CTGAAAGGGA CCGAAGCCCA GACGCTGACG
ACGGATGCCG CCGGCAAACC GTACATCAAA ACCGTGAACA GTTGGTCGGC GACCACAGCC
GACGGTGTCC ATAATGTGAC CCTCGACCGG GTGGAGACCT TCACCTATGA CGGTGTGGCG
GCAAGCCCGA AGCAGGTGGT GAAAGACTAC CAGTTCGACC AGTTCGGCAA CGTGACCCTG
GAGGCAGATT ATGGCGATGC TGCTGTCAGT GGCGACGAGC TGTTCACCTT CCGGGAATAC
GCCCAGAACG AGAACCTCTG GCTGCTGAAT AGGGTAAAAC GCCTCTACAG CGCCGCAACG
CCCGGCGGGG CGCACCTGCG GGAGAGCTGG TTCCAGTACG ACGGAGGCGA TCTGAATGCG
GTGCCGGTGC AGGGGAACCT CACACGGGAG GAGCATTTCC TGGATAGCGG CGAGAACCCG
GTAACCACCT ACCGCTACGA CAGCTATGGC AACCGCATTG AGACCATCGA CCCCGAGGGG
CGGGCGACGA AGGTGGAGTA CGATGCGGAC TACCATGCCT TCCCGGTGCG GGTGACCAAT
GCCAAGGGGC AGGTGACGGA GCGGCAGTTC GACCCAGCCA TCGGCAAGCC GGTGCTGGAG
AGAGACCCGA ACGGCGCCGA GACGGTGTAC GTCTATGACA ACTTCAAGCG GCTGATGAAG
GTGGTCAAGC CGGGTGACAC TCTCGCCTTC CCGACGACGG AGATCAATTA CAACCTGGAC
GGCAGCGCCC CGGAGAACGT GACCGTGAAG GCCCGCGAAC AGGCGGGCAC GGCCAATACG
CTGGATACTA TCCAGTCGGT GGACGGCCTC GGCCGGGTCA TCCAGACCAG GGCCGAATAC
CAGAACCCGG CATCCCAGAT TGTGGTCGAT ACCTTCCACG ACGCTATGGG GCGCGAGTCG
GGGCGCTCCC TGCCATACCT CGCCACCGCA AGCGTCGGTT ATTCTGCTCC TCTGGCGACA
CCGAAGACGG TGACCGAGTA TGACCCCATT GGGCGGCCGC TAAAGGTAAC TAATCCCGAC
GGGACCTTTA GCCTGCGCAG TTACAACCAC TGGTCCGTCA CGGAAACCAA CGAGAACAGC
CACCTGAAGC AGAAGTGGTT CGATGCGGAC GGCAAACTGG CGCAGGTGGC GGAGGTGAAC
GGCAGCGAGA CCTATCTCAC CCGCTACGGC TACAATCCGC TGGGGGAGCT GCTGACGACC
ACCAATCACC TGGGGAACAC CACCACCCAC AGCTACGACT CCCTGGGAAG GAAGACGAAA
GTGGTGGATC CTGATCTCGG CACACGGACA TCCCGTTACG ACCGGGTCGG CAATATCATC
GCCACCACCG ATGCAAAGGG GATTGCCACG AGGTTCACGT TCGACCCCCT GAACCGGGTG
ACGAAGGTCG ATTACCCGAA CGATCCGGAC ATTAGCTACG TCTATGACGA AGGGAAAGTT
GGTGCCCTGT CGCGGGTGAC CGACGCTCTG GGCACGGTCG CCTACACCTA CGACGCGCGG
CTGCGCAAGA CCGGCGAAAC CCGCACAATG GACGGCATGA CCTGGACGAC CTCGTGGGCG
TACGACCCTA TGGACCGCCT GACGAGCCAG ACCTACCCGG ACGGCCAGGT GACGACCTTC
TCCTACAACG GCATGGGGAA ACTGTCGGCA ATCTCCGGAA TTCTCAGCGC CATCGATTAC
AACCAGGCAG GGAGCGAAAC GCGGCGTGGC TACATTAACG GCCTCGCGAC CCAGTTCAAT
TACTACCCGG AAAACTTCCA CCTGAAGCGG ATTCTCACGA CGAACATTCA GAACTTCAGT
TACGAATACG ACTATGTGGG CAATGTGAAG AAGATCGTCA ACGCCACGCA GCCTGCATCG
CCGCGCACCG AGAACTTCAC CTACGATCCG CTCAACCGGC TGCTGATGGC CGAGGATGCC
GGCGCCGGCG GCTACCGGAA GGATTACCTC TACAACCCCA TCGGCAACAT GCTGACCGAA
ACCAGCGTGC AGAACGGGAC CACCAGCATG GCCCAGTACA CCTATGGGGA AGCAGGCGCA
GGCCCCCATG CGGTGACCGG CAAGACGGAC CAGAAACCGA TCGTGGCCCT GTTCTCCCTC
AACAACGGCC AGCCGTACAC CACCACCCGG CAGGTGACTC TCAGCAACGT CACCATCGGC
AACCCGAGCG AGTTCTTGGC CAGCGAGTCA CCAGAATTCG CCGGAGCCAG CTGGCAGCCA
TACGGAACCG CCATTTCCTA CACACTCACC GGCGATCCGG GGAAGAAGAC AGTTTACTTC
AAAGTCCGCA GGAACGGCAT TGAGTCGACC TACAAAATCG CCGAGATCGA GTATCTGTCG
GCCGATGTCG ACAGCGACGG CATCCCAGAC GCCTATGACA ACGACAGCAA CAACGACGGC
TTCCCCGATG CCTGGGCCAA CCGTTATGCC CTGGTAGGCA CGATCGATTC CCAGGCTGAC
CCGGATGGCG ATAGCTGGAA CAACCAGCGC GAGTACCAGC AGGGAACCGA CCCGACCAAG
GCCGACAACC CCCAGATGGA CAGCAGCAGT GATAATTACG TACTGAAGCG GGCCAGCTTC
TCGCAAACTG GTGCGGCACA GCTGAGCGAC AGCTACATCC TGCGCGACTC CCTGCAGCAG
GTCGGGTTCA ACCAGGGGGG CGGGCAACGC GAGAGCGAAA ACTATGCTCT GAACGATGCG
CTTGGCCGGC AGACAGGTTA CCTGGGGCTT GCTGACAGCG ATGGCGATGG CATCGCCGAT
ATCGTTGACG ATGACGACGA CAACGACGGC ATGCCCGATG TCTGGGAGGC AGCGAACGGG
TTGAATCCCC ACGACCGGGC CGATGCCCAG GCTGATCCCG ATGGCGACGG GATGGTCAAC
CTCCAGGAAT ATCTGAAGGG GACGAAGCCC ATTCTGGCAG ACTCGGACAG TGACGGTTTG
AGTGACTACC TGGAAGTATA TGTCTTCCAC ACAACTGCAA ATGGCAGTGA TCCTTTTATC
AGTGCAGACA GTGACGGCGA CGGGCTCCCC GATGCCAGCG ACACCGATCC TGCTCATTAC
AACGTAATCG CGATCAGTGA AGGATACACA CTGCGACACG GGAATTTCAG TGCAGGTTCA
GCACAGAGGA GCAGCGAAAC GTACTCCACA AGGGACAGGC TCGGAAACGG GGAAGCGGGA
GTATCGTTAT CAGTTAACAG CGGGGCACAC TTAAAGCCAA TCGCGCTGGA TTTCGGAACT
TATACTGGCA GTGTTAAAAC GATGCGGTTG ACTGTTACCA ATGCCGGATC AGAAAGCATA
GACCTTGGCA GTCTGACAAC AACCGGGATT AACCCCTATG AGTTTACTGT AGTCGCGAAC
GGGTGCTCTG GAAAGAGTAT GGCTGCGGCG TCGACCTGCA CGGTAGATGT TCAGTTTGTT
CCCTCCTATT CCGGCGCCAA AAGTGCACAG GTGGAGATAC CAACTTCCGA CAGCAATACC
CCACTTCTAT CGGCACAACT CACGGGTGTC GCCGCTGGTA TGAGTGACAG TCAGTCGCCG
ATTGGTTCTG TAGTCGTAGA TGATGGGCGA ACGTTTACAA GAAGTACTAC AGTTTCACTG
AAACTCACTG CAAAAGATGC CAGCGGCGCC TCTGAAATGT GCGTCAGCAA TGACAATGTT
TGTTCGAGGT GGGAACCTTA TATCGGGACA AAGGAATGGG TAATACCGGC AGGGGACGGC
CCGAAGACGG TTCATGCCTG GTATCGCGAC AAGTTAGGCA ATGCTACAAC TGCACCGTTG
AACGCGACAA TAACCCTTGA CACAGTAAGC CCGACAGTCA ACCTCTCTTT GCGGAGCGGG
ATATACAACT CTGGCCAAAC TGTTACGCTC ACGACCAGCG AGCCTGCAAC CATCTACTAT
ACGCTCAACG GCACGAACCC GACGACCGCA TCGTCAGTCT ATTCAAAACC GATACTTGTG
AGTGGTAACG CGATACTGAA ACTTGTCGCC ATTGATCTTG CTGGCAATGC CAGCTCTGTA
CAAACGGAAC AGTTTGTCGT CGATACAACT GGCCCATCCT TGTCGGTGAC AGCTCCGGTT
GCAGGGTCAT GGACAAGCTT GTCGACGGTG GAATTAACAG GCAAGACCAC GGACGGAACA
CGAGTAAGTC GGTTAACGAT TAACGGGGTC AGTGTGCCAC TTGCTTATGA TGGGTCCTTT
TCGCAGTCAC TTACTCTCTT GCCGGGACTT AACCAGATAA ATACTGCTGC GGTGGATGAG
GCTGGTAATC AAACAATAGA CTCCCGAGTA GTGGGCCTTG ATCAGCAGGC ACCATCAATA
GCCATAAGCC TCCCTGTCTC TGGAGAGACA GTTTGCGGGC CGAGTTATAT CATCAAGGGG
ACAGCTGGTG ATGGCAATGG GAGCGGTATC CAGAGGGTTG AGGTGTCAAC CGACGGTGGC
CAGAGCTGGA GAGTGGCAAG CGGGACGACA AACTGGAGCT TCGACTGGCA ACTGCCCGAG
CCAGGGGCTG TCAGCATCAA AGCTCGCGCC ACCGATGCTG CCGGAAATAC CGGCAATGCA
ACTGGCGCTA ACATAACAGT CCGTGCGGGC TATCGCCTTG ACATCACTAT TAACGGTACT
GGTAAGGGTG CAATCACCGG TCCTTCGGTC GGTATTTCCT GTAACAGCAC CTGCGGAGGG
TTCTACGAAA GCGGCTCAAC CATCACCCTT ACGGCAGAAC CGGACTATTC GTTGTTCACT
GGCTGGTCAG GGGCATGCTC GGGTACCGGA AACTGTATTA TTTCGCTCCA GTCGAATACC
ACAGTGACGG CTACTTTCAC GAAAGATGAT ACGCACGTTG TGCGTCTAGA TAGTCCGTCG
CCCTTGTATT ATTCGACTAT TCAGGCGGCT TATAATGCTG CTCCATCGAA CAGCACTATA
CAGATATGGG GAATAAACCT GACAGAAGCA TGTGTTCTCA ACAGGAACAT TTCGGTGATG
CTAAAAGGCG GTTACGATGA CCAGTACTCC GGAAATGCTG GCGTCACAAC AATAAATGGA
AGCCTCACAA TTTTCAATGG ATCTGTAGTG GTAGAGAAGT TAGTGATCAG GTGA
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| Protein sequence | MFCEAYKYIR ATIIGLVYLM AIFCVSVIFD SSVWAGNIFS YFYQSNLFTC TYYYDYKVEH
PSGVHGFAPR LSLSYNSFLV GNTNNQLGTG WEIPSNHIQK NSNDTYSLIL NGARHDLVDA
GNGRYRTRIE SYLKIEKKPC AANSSGEAWE VTAKDGTRYS FGITQDADNI LYPGIPETPQ
GWRWSLDRIT DTNGNAIYYS YVEDQGVVYP GRIEYNNDRQ RVIEFTWEDR PDPVSLVDEG
SAVTIAKRLS RIDVSVSGSL VKSIRLAYSP ITPETPLSLL SSITKYGSDG VTSLPPTRFT
YTQADAQTRL LETITSDLGG VTTIAYAPSS TCPNSSLPSN YWVVSSVTRD NGLPAGNSQR
TIVTTGYACA NGLFDVPSNE FRGFGMVTET HRDGTNIISQ VIHTFNQDDA LKGTEAQTLT
TDAAGKPYIK TVNSWSATTA DGVHNVTLDR VETFTYDGVA ASPKQVVKDY QFDQFGNVTL
EADYGDAAVS GDELFTFREY AQNENLWLLN RVKRLYSAAT PGGAHLRESW FQYDGGDLNA
VPVQGNLTRE EHFLDSGENP VTTYRYDSYG NRIETIDPEG RATKVEYDAD YHAFPVRVTN
AKGQVTERQF DPAIGKPVLE RDPNGAETVY VYDNFKRLMK VVKPGDTLAF PTTEINYNLD
GSAPENVTVK AREQAGTANT LDTIQSVDGL GRVIQTRAEY QNPASQIVVD TFHDAMGRES
GRSLPYLATA SVGYSAPLAT PKTVTEYDPI GRPLKVTNPD GTFSLRSYNH WSVTETNENS
HLKQKWFDAD GKLAQVAEVN GSETYLTRYG YNPLGELLTT TNHLGNTTTH SYDSLGRKTK
VVDPDLGTRT SRYDRVGNII ATTDAKGIAT RFTFDPLNRV TKVDYPNDPD ISYVYDEGKV
GALSRVTDAL GTVAYTYDAR LRKTGETRTM DGMTWTTSWA YDPMDRLTSQ TYPDGQVTTF
SYNGMGKLSA ISGILSAIDY NQAGSETRRG YINGLATQFN YYPENFHLKR ILTTNIQNFS
YEYDYVGNVK KIVNATQPAS PRTENFTYDP LNRLLMAEDA GAGGYRKDYL YNPIGNMLTE
TSVQNGTTSM AQYTYGEAGA GPHAVTGKTD QKPIVALFSL NNGQPYTTTR QVTLSNVTIG
NPSEFLASES PEFAGASWQP YGTAISYTLT GDPGKKTVYF KVRRNGIEST YKIAEIEYLS
ADVDSDGIPD AYDNDSNNDG FPDAWANRYA LVGTIDSQAD PDGDSWNNQR EYQQGTDPTK
ADNPQMDSSS DNYVLKRASF SQTGAAQLSD SYILRDSLQQ VGFNQGGGQR ESENYALNDA
LGRQTGYLGL ADSDGDGIAD IVDDDDDNDG MPDVWEAANG LNPHDRADAQ ADPDGDGMVN
LQEYLKGTKP ILADSDSDGL SDYLEVYVFH TTANGSDPFI SADSDGDGLP DASDTDPAHY
NVIAISEGYT LRHGNFSAGS AQRSSETYST RDRLGNGEAG VSLSVNSGAH LKPIALDFGT
YTGSVKTMRL TVTNAGSESI DLGSLTTTGI NPYEFTVVAN GCSGKSMAAA STCTVDVQFV
PSYSGAKSAQ VEIPTSDSNT PLLSAQLTGV AAGMSDSQSP IGSVVVDDGR TFTRSTTVSL
KLTAKDASGA SEMCVSNDNV CSRWEPYIGT KEWVIPAGDG PKTVHAWYRD KLGNATTAPL
NATITLDTVS PTVNLSLRSG IYNSGQTVTL TTSEPATIYY TLNGTNPTTA SSVYSKPILV
SGNAILKLVA IDLAGNASSV QTEQFVVDTT GPSLSVTAPV AGSWTSLSTV ELTGKTTDGT
RVSRLTINGV SVPLAYDGSF SQSLTLLPGL NQINTAAVDE AGNQTIDSRV VGLDQQAPSI
AISLPVSGET VCGPSYIIKG TAGDGNGSGI QRVEVSTDGG QSWRVASGTT NWSFDWQLPE
PGAVSIKARA TDAAGNTGNA TGANITVRAG YRLDITINGT GKGAITGPSV GISCNSTCGG
FYESGSTITL TAEPDYSLFT GWSGACSGTG NCIISLQSNT TVTATFTKDD THVVRLDSPS
PLYYSTIQAA YNAAPSNSTI QIWGINLTEA CVLNRNISVM LKGGYDDQYS GNAGVTTING
SLTIFNGSVV VEKLVIR
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