| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_4066 |
|---|
| Symbol | |
|---|
| ID | 8139440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4650002 |
|---|
| End bp | 4651513 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644871682 |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003023840 |
|---|
| Protein GI | 253702651 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4584] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 133 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGACCA TCCGTAAAGT CCGTAAAGCC CATTTCGTAG ACGGCAAGGG AATTCGCCAA
ATAGTCCGGG AGTTCAAGCT CGCCAGGAAC ACCGTCCGGG ACATCATCCG CAGCGGCAAG
ACCGATCAGA AGTATGAACG CAGCAAGCAG CCGCGCCCCA AGCTGGGGTT GTTCGCCGAC
CGGGTGTCAG AGCTGCTGAC GGACGATAGC GCCAAGCCGG TCAAGCATCG CCGCAGTGCA
CAGATCCTCT TCGAGCAGCT GCAGCGGGAA GGATACGAGG GCGGCTATGA CACCCTGCGG
CGCTATGTCG CCGCCTGGAA GCAATCAAAG GAAGCCGCTA CCGTCAGGGC GTTTATCCCG
CTGGCATACG ATCCCGGAGA CGCCTTTCAG TTCGACTGGA GCTACGAGTC GGTAGAGTTG
GGCGGCGTCC CGGTCGAAGT GAAGATCGCC CAGTTCCGCC TATGCCACAG CCGCAAGCCA
TACTGCGTCG GCTACACCCG TGAAAGCCTG GAGATGGTGC TTGACGCCCA CGTTCGGGCT
TTCGAGTTCT TCGGCGGTGT CTGCAAACGT GGCATCTACG ATAACCTGAA GACGGTCGTC
ACGAAGGTGC TGATAGGCAA AGACCGCGTC TTCAATCGGC GCTTCCAGAA CCTCGCCTCG
CATTACCTGT TCGATCCGGT GGCCTGTACC CCTGCAGCCG GGTGGGAGAA AGGACAGGTG
GAGAATCAGG TCGGCGTGGT AAGGAACCGC TTCTTCGCCA AGCGCAGGCG CTTTGCCGAT
CTCTCCGAGT TGAACGAGTG GCTGGAACAG GAATGCCGCA ACCATGGTGC AGCGGCGCGG
CATCCCGAGC GCAAGGACAG GACCATCGAC GAGGTGTTCG CCGAGGAGAA GGGCCATCTG
CTGACGCTGC CGGCGTCCCC CTTCGACGGC TACCAGGAGA GTGTAGCCCG CGTCTCGTCG
CAGTTGCTGA TCAGCTTCGA CCGGAACCGC TACAGCGTCA ACGCCATGGC CGTCGGCAAG
ACCGTTGCGG TGCGGGCCTA CGCCGACCGG ATCATCATGG TGCTCAATGA CAGGGTTGTC
GCCATGCACC GGCGCTACCT CGGCCGCGAC AAGGTCATCT ACGATCCCTG GCATTACATT
GCCGTGCTGG AGCAGAAGCC GGGCGCCTTG CGAAACGGCG CCCCCTTCAA GGGCTGGAAC
CTGCCGCCGT CTTTGCTGGA GGTCAAGACG AACCTGGAGG GACGTCCCGA CGGCGACCGC
CAGTTCGTGG CCATCTTGAG CGCCGTCCGT CGTTACAGCC TCGATGCCGT CGCTGAGGCG
TGCAGCCAGG CGCTAGTTGA TAAGACAGTA AGTTCCGATG TCATCCTCGC CATACTGTCC
CGAAAGCACG ACGAGCCGCA GCCGGGACCG GTCCAGGAGA CGGCGAACCT GCCGCAGCTC
ACATTGGTAC CCATAGTGGA CTGCCATCGC TATGACCTCC TTCTCTCCGG AGGTGCCCAT
GGGACTGCGT GA
|
|---|
| Protein sequence | METIRKVRKA HFVDGKGIRQ IVREFKLARN TVRDIIRSGK TDQKYERSKQ PRPKLGLFAD
RVSELLTDDS AKPVKHRRSA QILFEQLQRE GYEGGYDTLR RYVAAWKQSK EAATVRAFIP
LAYDPGDAFQ FDWSYESVEL GGVPVEVKIA QFRLCHSRKP YCVGYTRESL EMVLDAHVRA
FEFFGGVCKR GIYDNLKTVV TKVLIGKDRV FNRRFQNLAS HYLFDPVACT PAAGWEKGQV
ENQVGVVRNR FFAKRRRFAD LSELNEWLEQ ECRNHGAAAR HPERKDRTID EVFAEEKGHL
LTLPASPFDG YQESVARVSS QLLISFDRNR YSVNAMAVGK TVAVRAYADR IIMVLNDRVV
AMHRRYLGRD KVIYDPWHYI AVLEQKPGAL RNGAPFKGWN LPPSLLEVKT NLEGRPDGDR
QFVAILSAVR RYSLDAVAEA CSQALVDKTV SSDVILAILS RKHDEPQPGP VQETANLPQL
TLVPIVDCHR YDLLLSGGAH GTA
|
|---|
| |