Gene GM21_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_4024 
Symbol 
ID8139398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4607532 
End bp4608935 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content57% 
IMG OID644871640 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003023798 
Protein GI253702609 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value6.42797e-16 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAACGC CGAAAATACT GATCGCTGAC GACGACAAGA AAACCCGCGA CTTCGTAGCC 
GCCTTCCTGA GCTATAAGGG GTACCAGGTC TACCAAGCCT TCGATGGGCA GGACGCCCTG
CAAAAGATCG AGCTCCACGA AGTCCAGATG GTGATCACCG ACATCATGAT GCCTCGGGTC
AACGGACTGG AGTTCATCAA GCAACTAAAG TCGATACGCC CGGACATAGT CACCATAGCC
TACAGCGCCT TTGCCAACTT CGAGATGACC GCCAATCTCC TGAAAGCAGG CGCTTTTTTC
TACCTGGAAA AGCCTTTTAA TCTGGAGGAG CTTGAGACCC ACGTGAAGAG GGGGCTCGAG
CACCAGGCTC TGCAGAGCAA GAGCTTTCGG TCCAAACCGT GCATAAAGAA CAGGGCACTC
TTGAACAACA TCATCGGAGA GAGCGAAAAG ATGCTCTCGC TCTTCGAGAT GATCGAGAAG
GTTGCCACTT CCGATTCCAC CGTCCTGATC CAGGGGGAGT CCGGTACAGG GAAGGAGCTG
GTGGCCCGGG CCATCCATGA CCTCTCCAAC CGTTCGGACA AGAACTTCGT GGCGCTCAAC
TGTGCGGCCA TTCCCGACGA GCTTTTGGAA AGCGAGCTCT TCGGCCACGT GAAGGGTTCC
TTTACCGGCG CCGTCGCCTC ACGCATCGGC CGCTTCGAGA TGGCGGACAA GGGGACTCTG
TTCCTGGACG AGATCGGGGA CATGAAGGCG AACCTGCAGG TGAAGCTTTT GCGCGTGCTG
CAAAGCCGGG AGCTTGAGCC GGTAGGATCG ACCCGTTCCA AGAAGGTCGA CGTCAGGATC
ATCGCCGCCA CCAACCAGAA CCTGGACCAC ATGGTGGCGT CAAAGGAGTT CAGGGAGGAC
CTATACTACC GCCTCTCAGT GATTCCGATC ATGCTCCCCC CTTTGCGGGA GCGGGGTTCT
GACGTGCCGC TGCTGCTGAA CAGCTTCCTG GAGAAGTTCA ACCGGAGCAA ACAGCGCAAG
GTTCAAGGTT TTGACAAGCA GGTGATGGAG ATACTCAGCA ACTACGACTG GCCCGGCAAC
GTGCGGGAGC TGGAGAACCT GGTAGAGCGG CTGGTGATCA TCAAAACTAC CGGGGTCATC
AGCATCCACG ACCTCCCGGA GAAGTACCGC GGCGGTCGGA CCACGACGGT GCTGCATGGC
GAGCCGATGA CCCTTCCCGA CGACGGTTTC TGCCTCAACA GCGCCGTGGA GGAATTCGAG
AACCGGCTGA TCCTCCAGGC ACTGGAGAAA AGCGGCGGCA ACAAGAAGGA AGCTGCCGAG
CTTCTCAACC TGAAGCGCAC CACGCTGATA GAGAAGTTGA AGAAAAAGAA ACTCGTCTAC
GGGGAGGGTT CGGCCACCCC GTAA
 
Protein sequence
METPKILIAD DDKKTRDFVA AFLSYKGYQV YQAFDGQDAL QKIELHEVQM VITDIMMPRV 
NGLEFIKQLK SIRPDIVTIA YSAFANFEMT ANLLKAGAFF YLEKPFNLEE LETHVKRGLE
HQALQSKSFR SKPCIKNRAL LNNIIGESEK MLSLFEMIEK VATSDSTVLI QGESGTGKEL
VARAIHDLSN RSDKNFVALN CAAIPDELLE SELFGHVKGS FTGAVASRIG RFEMADKGTL
FLDEIGDMKA NLQVKLLRVL QSRELEPVGS TRSKKVDVRI IAATNQNLDH MVASKEFRED
LYYRLSVIPI MLPPLRERGS DVPLLLNSFL EKFNRSKQRK VQGFDKQVME ILSNYDWPGN
VRELENLVER LVIIKTTGVI SIHDLPEKYR GGRTTTVLHG EPMTLPDDGF CLNSAVEEFE
NRLILQALEK SGGNKKEAAE LLNLKRTTLI EKLKKKKLVY GEGSATP