Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_4024 |
Symbol | |
ID | 8139398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 4607532 |
End bp | 4608935 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644871640 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_003023798 |
Protein GI | 253702609 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 6.42797e-16 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAACGC CGAAAATACT GATCGCTGAC GACGACAAGA AAACCCGCGA CTTCGTAGCC GCCTTCCTGA GCTATAAGGG GTACCAGGTC TACCAAGCCT TCGATGGGCA GGACGCCCTG CAAAAGATCG AGCTCCACGA AGTCCAGATG GTGATCACCG ACATCATGAT GCCTCGGGTC AACGGACTGG AGTTCATCAA GCAACTAAAG TCGATACGCC CGGACATAGT CACCATAGCC TACAGCGCCT TTGCCAACTT CGAGATGACC GCCAATCTCC TGAAAGCAGG CGCTTTTTTC TACCTGGAAA AGCCTTTTAA TCTGGAGGAG CTTGAGACCC ACGTGAAGAG GGGGCTCGAG CACCAGGCTC TGCAGAGCAA GAGCTTTCGG TCCAAACCGT GCATAAAGAA CAGGGCACTC TTGAACAACA TCATCGGAGA GAGCGAAAAG ATGCTCTCGC TCTTCGAGAT GATCGAGAAG GTTGCCACTT CCGATTCCAC CGTCCTGATC CAGGGGGAGT CCGGTACAGG GAAGGAGCTG GTGGCCCGGG CCATCCATGA CCTCTCCAAC CGTTCGGACA AGAACTTCGT GGCGCTCAAC TGTGCGGCCA TTCCCGACGA GCTTTTGGAA AGCGAGCTCT TCGGCCACGT GAAGGGTTCC TTTACCGGCG CCGTCGCCTC ACGCATCGGC CGCTTCGAGA TGGCGGACAA GGGGACTCTG TTCCTGGACG AGATCGGGGA CATGAAGGCG AACCTGCAGG TGAAGCTTTT GCGCGTGCTG CAAAGCCGGG AGCTTGAGCC GGTAGGATCG ACCCGTTCCA AGAAGGTCGA CGTCAGGATC ATCGCCGCCA CCAACCAGAA CCTGGACCAC ATGGTGGCGT CAAAGGAGTT CAGGGAGGAC CTATACTACC GCCTCTCAGT GATTCCGATC ATGCTCCCCC CTTTGCGGGA GCGGGGTTCT GACGTGCCGC TGCTGCTGAA CAGCTTCCTG GAGAAGTTCA ACCGGAGCAA ACAGCGCAAG GTTCAAGGTT TTGACAAGCA GGTGATGGAG ATACTCAGCA ACTACGACTG GCCCGGCAAC GTGCGGGAGC TGGAGAACCT GGTAGAGCGG CTGGTGATCA TCAAAACTAC CGGGGTCATC AGCATCCACG ACCTCCCGGA GAAGTACCGC GGCGGTCGGA CCACGACGGT GCTGCATGGC GAGCCGATGA CCCTTCCCGA CGACGGTTTC TGCCTCAACA GCGCCGTGGA GGAATTCGAG AACCGGCTGA TCCTCCAGGC ACTGGAGAAA AGCGGCGGCA ACAAGAAGGA AGCTGCCGAG CTTCTCAACC TGAAGCGCAC CACGCTGATA GAGAAGTTGA AGAAAAAGAA ACTCGTCTAC GGGGAGGGTT CGGCCACCCC GTAA
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Protein sequence | METPKILIAD DDKKTRDFVA AFLSYKGYQV YQAFDGQDAL QKIELHEVQM VITDIMMPRV NGLEFIKQLK SIRPDIVTIA YSAFANFEMT ANLLKAGAFF YLEKPFNLEE LETHVKRGLE HQALQSKSFR SKPCIKNRAL LNNIIGESEK MLSLFEMIEK VATSDSTVLI QGESGTGKEL VARAIHDLSN RSDKNFVALN CAAIPDELLE SELFGHVKGS FTGAVASRIG RFEMADKGTL FLDEIGDMKA NLQVKLLRVL QSRELEPVGS TRSKKVDVRI IAATNQNLDH MVASKEFRED LYYRLSVIPI MLPPLRERGS DVPLLLNSFL EKFNRSKQRK VQGFDKQVME ILSNYDWPGN VRELENLVER LVIIKTTGVI SIHDLPEKYR GGRTTTVLHG EPMTLPDDGF CLNSAVEEFE NRLILQALEK SGGNKKEAAE LLNLKRTTLI EKLKKKKLVY GEGSATP
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