Gene GM21_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3945 
Symbol 
ID8139319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4530796 
End bp4531272 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content63% 
IMG OID644871562 
Productprotein of unknown function DUF296 
Protein accessionYP_003023720 
Protein GI253702531 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0000605525 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAGGTC TTTGGTACAA GGAGTGCGCC AACGGGAGGC GCTTCATCAT CAAGATCACC 
CCGGGCGAAA GCCTCACCAC GAGGCTTTTG CAGTTCGCGC ATCTCACCGA CGTGCGCTAC
GCCATGATCG TCTCGGCCCT GGGGAGCGTG AAGAACGTGA GGCTCAGAGG CATCAAGACC
GGCGCCAAGC TCCCCATCAC GGAGCCCCGC ATCACCATCC ACGACATCGA GGGGCCCTGC
GAGCTCTTGG GGCTGCAGGG GAACATCGTC CCCGGCGAGA GCGACCTTCT CGACTGCCAC
TTCCACATCA TGATGTCCAA GTCCTCCGGG GAGGTCGTCG GGGGGCACCT CTACGACGCC
GAGGTCTTCG CCACCTGCGA GATCGTCCTC ACCGAACTGG ACGTCTCCGG CGTCGAGCGG
CATGTCTCCA AGGTGGGGGG GATCCCCACC ATCTACATCG ACGAGGAGGC ACCTTGA
 
Protein sequence
MEGLWYKECA NGRRFIIKIT PGESLTTRLL QFAHLTDVRY AMIVSALGSV KNVRLRGIKT 
GAKLPITEPR ITIHDIEGPC ELLGLQGNIV PGESDLLDCH FHIMMSKSSG EVVGGHLYDA
EVFATCEIVL TELDVSGVER HVSKVGGIPT IYIDEEAP