Gene GM21_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3907 
Symbol 
ID8139281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp4495107 
End bp4495376 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content59% 
IMG OID644871524 
Productflagellar biosynthetic protein FliQ 
Protein accessionYP_003023682 
Protein GI253702493 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.00325384 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCCGG AAATGGTAGT CCAACTCGGC AGAAGAAGCT TCGAGGCGGT GATCCTCCTT 
TCGGCCCCGC TGCTCATCTG CGCACTGGTG GTGGGCCTTC TCATCAGCAT CTTCCAGGCG
GTCACCTCGA TCAACGAGGC GACCCTCGCC TTCGCCCCGA AGATCGTCGC CGTCATGGTG
GCGATGGTCG TCTTCTTCCC CTGGATGATG ATGTACATGA GCGACTTCAC CCGCGAAATC
TACGGCATGA TCGCCAACAT GAGGCATTAG
 
Protein sequence
MTPEMVVQLG RRSFEAVILL SAPLLICALV VGLLISIFQA VTSINEATLA FAPKIVAVMV 
AMVVFFPWMM MYMSDFTREI YGMIANMRH