| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3887 |
|---|
| Symbol | |
|---|
| ID | 8139261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | + |
|---|
| Start bp | 4474723 |
|---|
| End bp | 4476159 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644871504 |
|---|
| Product | transglutaminase domain protein |
|---|
| Protein accession | YP_003023662 |
|---|
| Protein GI | 253702473 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 0.978849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCTCC CATTAAACCT ACTGCGGCTG ATTATCGCCT CGCTGCTGGT GCTGCTGCCG
CTCCAGCTTT TCGCAGCTCC CCTTCCCAAG CTGACCGAGC TGCCGCTCGG GGAGCGCTGG
TTCAGCATCA AGCTCGGCGA CGAGCGGGTC GGCTTCAGCC GGCTCACCAT CACCCGGACC
GATGCGGGCT ACCGCATCGA TTCCGAGGGG AGCGTGAAGA TGCGGGTGAT GGGGTTCTCC
AGGGAGGCCA CCTCCAAGGA GTCCTACCTG GTCGCCCGGG ACCTCGCGCT GCAATCATTC
TCGGCAGAGA ACCGCATCGA CGGCAGCCCC GTCACCACTA CCGGCGAGGT CACCCCTAAG
GGAGTGACAA TCGTCTCCCA GTCCGGCAGC GGGAAGAAGG AGCGGACCCT CAAGTTGAAG
GGGGCGCTTT ACCCCCCCCA CGCGCTGAAC CTTTACCCGC TCATGCAGGG TGCGACCAAG
GGTAAAAGCT ACAAGCTCCC GGTGCTGGAC GTGGAAGCGC TTAAGGTGAA GCAGCTCAAG
GTCGAGGTGG TCGGCGAGGA GACGCTTCCG CCGGGGCGGC AGGTGATCCA TCTGAAGAAC
GACGCCTACC CCATGGTCGA TAACGATATA TGGGTGGACC TCCAGGGGAA CGTGCTCAAG
GAGTCGGTCC GCGACGACCT GGTGGTCACC GAGGCCGAGG ACGAGGCGAC CGCCCGTGCG
GAACTTGCGC GCGACGCGCT CTGCAAGACG GACCTGGTGC TGGATTTCAG CATGATCCGG
GTCACCCCCC CTATCGAGCG TCCAGCCCAA TTGCAGAAGC TGGTACTGGA GATGACAGGC
ATCCCGTCGC AGCTGCCGCT TTTGCAGGGG ACAAGGCAGC AGGTGGTGCG CAGGGCCGAC
GGTACGGTGC TCGTCACCAT GCCCAACCCC GCCCTAGTCG CCGAAGCGCC CCCAACCGCC
GCCGATCTGG AACCGGCGGA GCGGATACCG AGCGACCACC CGGAGATAAA GGCGAAAGCC
GTGGAGATAA TGGGGAGCGA GCAGGATCCG GCTCAGGTAG CGAAGCTTCT GTCCGACTGG
GTGGCCCGCG AGATAAAGGG GGCAGTGACC GACAGCCAGT CCCCCCTGGA AACGCTCAAA
ACCCGCATCG GCAACTGCCA GAGCCACGCG AGGCTCTACG CTTCCCTCGC ACGCGCCTCC
GCAATCCCGA CCCGCTTCGT GTCCGGGATC GTCCACCAGG GGGAGGGCTT TCTCTACCAT
AGCTGGGCGG AAAGCTACTT GGGCGGCGCC TGGGTCCCCA TCGATCCCAC CTTCGGCGAG
ATGCCTGCCA ACCTGAGCCA CGTCAAGTTC GTCGATGGGG AAACGCTGGA CGAAATGGGG
TCGCTGGCGG GGATGATCGG GAAGGTACGG GCGAAAGTCG TGGAAAAGCG GTACTGA
|
|---|
| Protein sequence | MTLPLNLLRL IIASLLVLLP LQLFAAPLPK LTELPLGERW FSIKLGDERV GFSRLTITRT
DAGYRIDSEG SVKMRVMGFS REATSKESYL VARDLALQSF SAENRIDGSP VTTTGEVTPK
GVTIVSQSGS GKKERTLKLK GALYPPHALN LYPLMQGATK GKSYKLPVLD VEALKVKQLK
VEVVGEETLP PGRQVIHLKN DAYPMVDNDI WVDLQGNVLK ESVRDDLVVT EAEDEATARA
ELARDALCKT DLVLDFSMIR VTPPIERPAQ LQKLVLEMTG IPSQLPLLQG TRQQVVRRAD
GTVLVTMPNP ALVAEAPPTA ADLEPAERIP SDHPEIKAKA VEIMGSEQDP AQVAKLLSDW
VAREIKGAVT DSQSPLETLK TRIGNCQSHA RLYASLARAS AIPTRFVSGI VHQGEGFLYH
SWAESYLGGA WVPIDPTFGE MPANLSHVKF VDGETLDEMG SLAGMIGKVR AKVVEKRY
|
|---|
| |