Gene GM21_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3878 
Symbol 
ID8139252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand+ 
Start bp4463930 
End bp4464619 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content59% 
IMG OID644871495 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003023653 
Protein GI253702464 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value0.709818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA GCGTGGAGAA GCACCTTACC CTTAGGGAAC GGATACTTGA GACTATCCGG 
GACGCGATCA TGTCGGGTGC TCTTAAGCCC GGAGAGAAGG TTGCAGAGCC GGAACTCGCC 
TCCCGCTTCG GCATCAGCCG CACCCCGATA CGCGAAGCGT TCCGGCAGCT GGAATCGGAA 
GGGTACCTCT CGGTAGTACC GCGCAAGGGG GCGCTGGTCG CCTGCTTCTC CCCGAAGGAC 
GTCGAAGAGT TCTACGCCAT CAAGAGCATT CTCGAAGGGT ATGCCGCCCG CAAGGCGTGC 
GCCATGCTCA GCACCCGCGA AATCAACAAG CTGGAAGCGA TCAACGAAAA GCTCAGGGAG 
ATAGCCGAGG AAGGGGATGT GCGCCACTTC TTCAAAGTGC ACAACAGCTT CCATGATCTT 
TTCATCAAGG GAGCCGGCAA CGACAAGCTG CACGACATGA TCGCCCAGCT CCTCAAGAAG 
TTCCAGCGCC TGCGCATGGC TTCGCTCAGC AAGCCCGGCA GGATGCAGCT CTCCGTGGAG 
GAGCACGAAA AAATCATCGA GGCGTTCCGC AACAGGGACG CGGTCCTGGC CGAGATGCTG 
GTCCAAAAGA ACGCCGAGTA CGGCGGCAAG GTCCTGATCG AAGAAGAAAG CGCCACCGAG 
CTCTGGAACA GCAAGGGGCT TGACCTTTAA
 
Protein sequence
MKKSVEKHLT LRERILETIR DAIMSGALKP GEKVAEPELA SRFGISRTPI REAFRQLESE 
GYLSVVPRKG ALVACFSPKD VEEFYAIKSI LEGYAARKAC AMLSTREINK LEAINEKLRE 
IAEEGDVRHF FKVHNSFHDL FIKGAGNDKL HDMIAQLLKK FQRLRMASLS KPGRMQLSVE 
EHEKIIEAFR NRDAVLAEML VQKNAEYGGK VLIEEESATE LWNSKGLDL