| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3725 |
|---|
| Symbol | |
|---|
| ID | 8139099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 4292990 |
|---|
| End bp | 4294315 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644871344 |
|---|
| Product | ABC-3 protein |
|---|
| Protein accession | YP_003023502 |
|---|
| Protein GI | 253702313 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 94 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCC TGGTTCAAGC GTTTTGGGCT CCGCTCACCG AGACCTATTT CCAGAAGGCC
CTGATCGGCG GCTGCGCCGT GGCGCTCGTT TCCGGTGCGG TGGGGTCGCT GGTGGTGTTG
AGGCGGATGG CCTTTCTGGG GGACGCCCTC TCCCACGCCA TGATCGCCGG GGTGGCGGGA
GGCTACCTCG CCATGAAGCT CCTCTTCGGG GTGGAGGCTT ACGCGCCCGC CATGCTGCTC
GGCTCGCTCA TCGCCGCCAT CATCACCGTC GCCCTGATCG GGGTGGTCTC CAAGGTCTCC
CGGGTCAAGG AGGACACGGT CATCGGCATC ATGTACACCG GCGTCTTCGC CCTGGGCGTC
GTGGTGGTCT CCATCTTCCG GGAGTACATC CACATCGACC TGATGCACTT CATCATGGGG
GACATCCTGG GGGTGGCCGA CACCGACCTT TGGGCCAGCG CCATCGTCTC CGCCTCCGTC
CTCACCGTCC TCATCCTCTT CTTCCGCCAC TTCCAGGTGG CGAGTTTCGA TCCCATCATG
GCGGCCTCGA CCGGGCTGCC GGTGCTTCTT TTGGACTACG CGCTGACCGG GTGCGTCTCC
ATGGTGGTAG TGAGCGCCGT GAGCATGGTG GGGGTGATAC TGGTGGTGGG GCTTTTGATC
ACGCCGGCTG CGACCGCCTA CCTTTTGAGC GACCGGCTGG ACAAGATGAT GGCGCTGGCG
TCGCTGTTCG GGGTGACCAG CGTGATCGGC GGGTTGTATC TCTGCGTCTG GCTGGACTCG
GCGGGGGGCG GTGCGGTGAT GCTCTTTTGC ACCCTGCAGT TTCTCGCGGT GCTGGTGGTG
GCGCCGCGCT ACGGGCTTTT GGCCCGGTGG CGCCGGTTGC GCAACGTGAT ACCGCAGCAG
GTGGTGGAGG ACGTGCTGAT CACCGTCTTG CGCCAGCAGA AGGAGACCCC GCTCAAGGTG
CTGCAGCAGT TCGTGCAGGT GCCGCAGCCG GGGAGCCTAT GGAAGGCGGT GAAACAGATG
GAGGCCGAGG GTTTGATCGA GGCCTTGCCG CAGGGGTACC GGCTGACCGG GGTGGGGGAG
AAGCAGGCGG CGAACGTGCT GCGCGCCCAT CGTCTGTGGG AGAGTTATCT CGCCTCCATC
GGGACCCCCG AGGAGGCGGT GCATCCGACG GCACATCGGC TGGAGCACAT CCACGGCGCC
GGCATCGTCG ACTACCTGGA TCAGAAGCTG GGGCAGCCCG AGGTCGATCC CCACGGACAG
AGGATTCCCA GGCGCGGCAA CGGCGCGAAA AGCAAGGCTT CCGACACGGA TCCGGAGGAA
CAGTAA
|
|---|
| Protein sequence | MNFLVQAFWA PLTETYFQKA LIGGCAVALV SGAVGSLVVL RRMAFLGDAL SHAMIAGVAG
GYLAMKLLFG VEAYAPAMLL GSLIAAIITV ALIGVVSKVS RVKEDTVIGI MYTGVFALGV
VVVSIFREYI HIDLMHFIMG DILGVADTDL WASAIVSASV LTVLILFFRH FQVASFDPIM
AASTGLPVLL LDYALTGCVS MVVVSAVSMV GVILVVGLLI TPAATAYLLS DRLDKMMALA
SLFGVTSVIG GLYLCVWLDS AGGGAVMLFC TLQFLAVLVV APRYGLLARW RRLRNVIPQQ
VVEDVLITVL RQQKETPLKV LQQFVQVPQP GSLWKAVKQM EAEGLIEALP QGYRLTGVGE
KQAANVLRAH RLWESYLASI GTPEEAVHPT AHRLEHIHGA GIVDYLDQKL GQPEVDPHGQ
RIPRRGNGAK SKASDTDPEE Q
|
|---|
| |