Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3720 |
Symbol | |
ID | 8139094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 4285198 |
End bp | 4285872 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644871339 |
Product | two component heavy metal response transcriptional regulator, winged helix family |
Protein accession | YP_003023497 |
Protein GI | 253702308 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCC TGATCGTCGA GGACGAACAA AAGGCCGCCA ACTATCTCAA AAAGGGGCTT ACCGAGAACG GCTTCAGCGT GGACATCGCC AACGACGGCG AGGACGGGCT GCACCTGGCC CTGACCGAGG TGTACAGCCT GATCATCCTC GACGTGATGC TGCCGATTCG CGGCGGATGG TCCATCATCA AGGAGCTGCG CGCGGCGGGA AACGACGTCC CCGTCATCTT CCTGTCGGCG CGCGACGAGG TGCACGACCG GGTGCACGGC CTGGAGCTTG GCGCCGACGA TTACCTGGTG AAACCCTACG CCTTCTCGGA GCTTCTGGCC CGCATCCGCA TCATCCTGCG CCGCTGCCCG CTGCAGCAAT CCGAGTCCAT GAAGCTGGCC GACCTGGAGT TGGACCTGAT CCGGCACAAG GCCCGGCGCG GGGGGCGCTC GCTCGACCTC ACCGTCAAGG AATTCCAGCT TCTGGCCCTG ATGCTGCGCC GGCACGGCGA GGTCTTAAGC CGCACCACCA TCTCCGAACA GGTCTGGGGC ATCAACTTCG ACACCGACAC CAACGTGGTG GACGTGGCTA TCAGGAGGCT CAGGAAGAAG GTCGACGACC CCTTCCCGGT CAAGCTCATC CAAACCATAA GGGGAGTAGG CTATGTCCTC GACGAGTGCG CCTGA
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Protein sequence | MRILIVEDEQ KAANYLKKGL TENGFSVDIA NDGEDGLHLA LTEVYSLIIL DVMLPIRGGW SIIKELRAAG NDVPVIFLSA RDEVHDRVHG LELGADDYLV KPYAFSELLA RIRIILRRCP LQQSESMKLA DLELDLIRHK ARRGGRSLDL TVKEFQLLAL MLRRHGEVLS RTTISEQVWG INFDTDTNVV DVAIRRLRKK VDDPFPVKLI QTIRGVGYVL DECA
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