Gene GM21_3419 details

Gene Information

• Locus tag: GM21_3419
• Symbol: lpxD
• ID: 8138786
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3952007
• End bp: 3953044
• Gene Length: 1038 bp
• Protein Length: 345 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644871036
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_003023201
• Protein GI: 253702012
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 118
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAAAGA CACTTCGTGA GATTGCAGAG TACCTGGGAG GGACGGTCTC CGGCGACGGA 
GAAGTCCTGA TCGGCGGCCT CGCGACCTTG GACGACGCGG GGGAGGGGAC GCTTACCTTC 
CTCGCCAACC CGAAGTACGC CGCCAAGGTC GCCACCACCA AGGCCTCGGC GGTGCTGATG 
GGGACCGGGG GGAACACCCA CGGCAAGAAC GCCATCTTCC ACCCCAACCC CTACCTCGCC 
TTCGCCAAGC TGCTCACCCT GTTTTACACG GCTCCGGCAA AGCCGGTCGG CGTGCTGCCG 
GGCGCCTTCG TCGCCGATGG GGTGAAGCTC GGGGCGGACG TCTCGGTGTA CCCGGGCGCC 
TCCATCGGCG CCGGGGCCGT GATCGGAGAC CGGGTGGTCC TGCACCCGGG GGTCGTGCTC 
TACCCGGGCG TCGTGGTCGG CAACGACGTG ACGCTGCACG CCAACGTGAG CGTCCGCGAG 
CGTTGCCGGA TCGGCAACCG CGTCACCATC CACGACGGGA CCGTGATCGG CTCCGACGGC 
TTCGGCTATG CGCCCGACGG CGCCTCCTAT TACAAGATCC CGCAGATCGG CATCGTCATC 
ATCGAGGACG ACGTCGAGAT CGGCTCCAAC TGCGTCATCG ACCGCGCGGC GCTTGAGGCC 
ACCCGGATCC GCCGCGGCAC CAAGATCGAC AACCTGGTGC AGATCGCGCA CAACGTCGTC 
ATCGGCGAGG ACTGCATCAT CGTCTCCCAG GTCGGCATCT CCGGCAGCAC CCAGTTAGGG 
AACCACGTCA CCCTGGGCGG CCAGGTCGGC GTCGCCGGTC ACATCAAGAT CGGCGACAAC 
GTCATGATCG GCGCCAAGTC GGGCGTGGCG GGGAACGTGG AGCCGAACCA GGTGCTTTCC 
GGCATCCCGG TCATGCCGCA CCGCGACTGG CTCAGGTCCG CTGGCATAGC TCCCAAGCTT 
CCCGAGATGA AGAAGACGCT CTCGGCGCTG GAAAAGCGGG TGGCGGAGCT GGAAGCGAAA 
CTGGCCAAGG GGGAGTAA 

 

Protein sequence

MKKTLREIAE YLGGTVSGDG EVLIGGLATL DDAGEGTLTF LANPKYAAKV ATTKASAVLM 
GTGGNTHGKN AIFHPNPYLA FAKLLTLFYT APAKPVGVLP GAFVADGVKL GADVSVYPGA 
SIGAGAVIGD RVVLHPGVVL YPGVVVGNDV TLHANVSVRE RCRIGNRVTI HDGTVIGSDG 
FGYAPDGASY YKIPQIGIVI IEDDVEIGSN CVIDRAALEA TRIRRGTKID NLVQIAHNVV 
IGEDCIIVSQ VGISGSTQLG NHVTLGGQVG VAGHIKIGDN VMIGAKSGVA GNVEPNQVLS 
GIPVMPHRDW LRSAGIAPKL PEMKKTLSAL EKRVAELEAK LAKGE