Gene GM21_3381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_3381 
Symbol 
ID8138748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3912827 
End bp3913693 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content65% 
IMG OID644870999 
Producthopanoid biosynthesis associated protein HpnK 
Protein accessionYP_003023164 
Protein GI253701975 
COG category[S] Function unknown 
COG ID[COG3394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03473] hopanoid biosynthesis associated protein HpnK 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones109 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAT TAGTGATCAA CGCCGACGAC TTCGGCCTTT CCAGGGGCGC CAACCACGGC 
GTCTATCGGG GGTGGGAGGA CGGGGTTTTG ACCAGCGCCT CCCTCATGGT CGGGGGGGAA
GCCTTCGAGG AGGCCGTGGC CTACGCCCGC GCCAACCCCG CGCTGCAGGT CGGGCTGCAC
CTGACCCTGG TGCAGGGAAG CGGCGTGCTG ACGCAACACG GCCTGCCGCC GTTGACCGAC
GTGAGCGGCT ACTTCGGCGA CGACCCGGTG CTGGCGGGGA TGCGCTTTTT CTTCCTGAAG
CCCTTGAGAA AGAAGCTGCA CCAGGAGATC GAGGCGCAAA TCCGGAAGTG CCTCGATGCC
GGCGTGGAGC TCGCCCACAT CGACGGGCAC CTCAACATCC ACATGCACCC GGTGGTGTTC
GACATCCTCT GCGAGCTGAT GCCGCGCTAC GGCATCAGGA GCTTCCGGCT CACCCGCGAA
AACTTAGCCG CGAACCTCGC CCAGGACCGA AAGAGGATGG TCGGGAAATG CGCCGACGCC
TTCATCTTCG CCTCGCTCGC CAAGCGCTGC CGCCCGATGC TCGACCGGCT CGGGATCCGG
TACGCGGCCG AGGTGAAGGG GCTGCTCAAT TCGGGGCGGA TGACGGAACA GTACCTGCTG
CGGGCGCTGG AGAGCGTGGG GGAAGGTCTC ACCGAGATCT ACTTCCATCC CGGCCGCCGT
CCCTGCGAGA CGCTGGAGCG CCGGATGCCG GAGTACCTGC ACGACCAGGA ACTGGCCGCT
CTGACCAGCC CGAATACGGC GCGGAAGCTG GCTCAGCTGG GGATCCGGCT CAGAAATTAT
CGGGGAGAGG AAAAGACGTA TGCTTAA
 
Protein sequence
MKELVINADD FGLSRGANHG VYRGWEDGVL TSASLMVGGE AFEEAVAYAR ANPALQVGLH 
LTLVQGSGVL TQHGLPPLTD VSGYFGDDPV LAGMRFFFLK PLRKKLHQEI EAQIRKCLDA
GVELAHIDGH LNIHMHPVVF DILCELMPRY GIRSFRLTRE NLAANLAQDR KRMVGKCADA
FIFASLAKRC RPMLDRLGIR YAAEVKGLLN SGRMTEQYLL RALESVGEGL TEIYFHPGRR
PCETLERRMP EYLHDQELAA LTSPNTARKL AQLGIRLRNY RGEEKTYA