Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3381 |
Symbol | |
ID | 8138748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3912827 |
End bp | 3913693 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644870999 |
Product | hopanoid biosynthesis associated protein HpnK |
Protein accession | YP_003023164 |
Protein GI | 253701975 |
COG category | [S] Function unknown |
COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03473] hopanoid biosynthesis associated protein HpnK |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 109 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAT TAGTGATCAA CGCCGACGAC TTCGGCCTTT CCAGGGGCGC CAACCACGGC GTCTATCGGG GGTGGGAGGA CGGGGTTTTG ACCAGCGCCT CCCTCATGGT CGGGGGGGAA GCCTTCGAGG AGGCCGTGGC CTACGCCCGC GCCAACCCCG CGCTGCAGGT CGGGCTGCAC CTGACCCTGG TGCAGGGAAG CGGCGTGCTG ACGCAACACG GCCTGCCGCC GTTGACCGAC GTGAGCGGCT ACTTCGGCGA CGACCCGGTG CTGGCGGGGA TGCGCTTTTT CTTCCTGAAG CCCTTGAGAA AGAAGCTGCA CCAGGAGATC GAGGCGCAAA TCCGGAAGTG CCTCGATGCC GGCGTGGAGC TCGCCCACAT CGACGGGCAC CTCAACATCC ACATGCACCC GGTGGTGTTC GACATCCTCT GCGAGCTGAT GCCGCGCTAC GGCATCAGGA GCTTCCGGCT CACCCGCGAA AACTTAGCCG CGAACCTCGC CCAGGACCGA AAGAGGATGG TCGGGAAATG CGCCGACGCC TTCATCTTCG CCTCGCTCGC CAAGCGCTGC CGCCCGATGC TCGACCGGCT CGGGATCCGG TACGCGGCCG AGGTGAAGGG GCTGCTCAAT TCGGGGCGGA TGACGGAACA GTACCTGCTG CGGGCGCTGG AGAGCGTGGG GGAAGGTCTC ACCGAGATCT ACTTCCATCC CGGCCGCCGT CCCTGCGAGA CGCTGGAGCG CCGGATGCCG GAGTACCTGC ACGACCAGGA ACTGGCCGCT CTGACCAGCC CGAATACGGC GCGGAAGCTG GCTCAGCTGG GGATCCGGCT CAGAAATTAT CGGGGAGAGG AAAAGACGTA TGCTTAA
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Protein sequence | MKELVINADD FGLSRGANHG VYRGWEDGVL TSASLMVGGE AFEEAVAYAR ANPALQVGLH LTLVQGSGVL TQHGLPPLTD VSGYFGDDPV LAGMRFFFLK PLRKKLHQEI EAQIRKCLDA GVELAHIDGH LNIHMHPVVF DILCELMPRY GIRSFRLTRE NLAANLAQDR KRMVGKCADA FIFASLAKRC RPMLDRLGIR YAAEVKGLLN SGRMTEQYLL RALESVGEGL TEIYFHPGRR PCETLERRMP EYLHDQELAA LTSPNTARKL AQLGIRLRNY RGEEKTYA
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