| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3338 |
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| Symbol | rplA |
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| ID | 8138700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3866164 |
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| End bp | 3866865 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644870951 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_003023121 |
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| Protein GI | 253701932 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.000142685 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTATGT CAAAGAAGCT TAAAGAGGCT CGCGCCAAGG TCGACAGGAC CAAAACCTAT
CCCCTCGCGG ACGGCATTGA GCTGGTAAAG GGCGCGGCGT TCGCCAAGTT CGACGAGACC
GTCGACCTCG TGGTGAAGCT GGGCGTCGAT CCCCGTCACG CCGACCAGAT GGTTCGTGGC
GCCGTGGTGC TCCCGAACGG CCTGGGCAAG GACGTGCGCG TCCTGGTCTT CGCCAAGGGC
GAGAAGGAGA GGGAGGCCCG TGAGGCCGGT GCCGATTACG TTGGCGCCGA CGACCTGGTC
GCCAAGATCC AGGCTGGCTG GTTCGACTTC GACACCGCCA TCGCAACCCC GGACATGATG
GGTGTTGTCG GCAAGATCGG CAAGCTCCTC GGTCCCCGCG GCCTGATGCC GAACCCGAAG
GTCGGCACCG TGACCTTCGA CCTGGCCCGC GCCATCAAGG AGTCCAAGTC CGGTAAGGTC
GAGTTCCGCG TCGAGAAGGC CGGTATCGTC CACGCCCCGG TTGGGAAGGT CTCCTTCGCC
GCCGACGTGC TGAAGCAGAA CGTGGTCGCA CTGGTGGAAG CCCTCCAGAA AGCGAAACCG
GCTGCAGCCA AGGGTACCTA CATGAAGAAG ATCTCCGTAT CTTCCACCAT GGGCCCGGGC
GTCAACATCG ATCTCGCTGA CATCAGCGCG ATCTTGAAAT AA
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| Protein sequence | MSMSKKLKEA RAKVDRTKTY PLADGIELVK GAAFAKFDET VDLVVKLGVD PRHADQMVRG
AVVLPNGLGK DVRVLVFAKG EKEREAREAG ADYVGADDLV AKIQAGWFDF DTAIATPDMM
GVVGKIGKLL GPRGLMPNPK VGTVTFDLAR AIKESKSGKV EFRVEKAGIV HAPVGKVSFA
ADVLKQNVVA LVEALQKAKP AAAKGTYMKK ISVSSTMGPG VNIDLADISA ILK
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