Gene GM21_3327 details

Gene Information

• Locus tag: GM21_3327
• Symbol: rplD
• ID: 8138689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3850293
• End bp: 3850916
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 644870940
• Product: 50S ribosomal protein L4
• Protein accession: YP_003023110
• Protein GI: 253701921
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 8.78315e-16
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGCAAAGC TAGACGTATT TGACATCAAG AAAGCAAAGG TCGGTGAGAT CGAGCTCGAC 
GACGCAGTCT TCAACGACGA CGTCCGCGAG TACCTGATCC ACGAGGCCGT AAAGATCCAG 
CTCGCTAACC GCAGGCAGGG TACCGTTGCC GTCAAGAACC GCGCCCTCGT TGCAGGTTCC 
GGCAAGAAGC CGTTCAAGCA GAAGGGAACC GGCCAGGCCC GTCAGGGTTG CCGCAGGGCT 
CCGCAGTACC CGGGCGGCGG CGTCGCCTTC GGCCCTCAGC CGAAAGACTA CAACCTCTCC 
ATGAACAAGA AGGCGAGGAA GGCGGCACTG AGAAGCGCTC TTTCGATGCT CTACAAGAAG 
GACGCAATCA CCGTGGTGAA CAGCTTGGAG CTTCCCTCCA TCAAGACAAA GGCATTTGTT 
GAGGTACTAA CTGCTTTTAA CCTTGACAAG ACGCTCGTTA TCACTGATAC TGCGACTCCC 
ACTTTAGAAC TGTCCGCCCG CAATGTGAAA CACGTCAAGG TGCTGGGTCC TGAAGGTCTC 
AATATTTTCG ACATTATGAA ATACCAGAGC GTCGTCTTTA CCGAGGCAGC CGTTCGTCGT 
GTTGAAGGAG CATTACAGTC ATGA 

 

Protein sequence

MAKLDVFDIK KAKVGEIELD DAVFNDDVRE YLIHEAVKIQ LANRRQGTVA VKNRALVAGS 
GKKPFKQKGT GQARQGCRRA PQYPGGGVAF GPQPKDYNLS MNKKARKAAL RSALSMLYKK 
DAITVVNSLE LPSIKTKAFV EVLTAFNLDK TLVITDTATP TLELSARNVK HVKVLGPEGL 
NIFDIMKYQS VVFTEAAVRR VEGALQS