Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3313 |
Symbol | rplF |
ID | 8138675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3844459 |
End bp | 3844998 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644870926 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_003023096 |
Protein GI | 253701907 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.000000000224387 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTAGAA TAGGAAAACT TCCCATCGCG ATTCCTGCGG GGGTGAAAGT CATATACAAC GCCCCGGAGA TCAAGGTGGA GGGCCCGAAA GGGAAACTCG CCCGCAACAT CGGGGAAGGC GTCGCCATCG ATGTGACCGC GCAGGCGATC ACGGTGACCA GGAACGACGA CACCATCAAG TCCCGCTCGG CCCACGGCCT GACCAGGACC CTGATCAACA ACATGGTGGT CGGCGTCTCC AAAGGGTTCG AGACCCTGCT CGAGATCAAC GGCGTCGGTT ACCGCGCCGA GGTGAAGGGC AACGTGCTGA ACCTGGCCCT GGGCTTCTCG CACCCGGTCA ACTTCGAGCT TCCGGCCGGC ATCACGGTCG AGGTCGAGAA GATGACCAAG CTCAAAGTAA TGGGCATCGA CAAGGAGATG GTCGGCGAGA CCGCCGCCAA GATCCGCGCG TTCCGTCCGC CCGAGCCGTA CAAGGGGAAG GGTGTCAAGT ACGCTGACGA AACGATTCTG AGAAAAGCCG GCAAGACCGG TAAAAAATAG
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Protein sequence | MSRIGKLPIA IPAGVKVIYN APEIKVEGPK GKLARNIGEG VAIDVTAQAI TVTRNDDTIK SRSAHGLTRT LINNMVVGVS KGFETLLEIN GVGYRAEVKG NVLNLALGFS HPVNFELPAG ITVEVEKMTK LKVMGIDKEM VGETAAKIRA FRPPEPYKGK GVKYADETIL RKAGKTGKK
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