Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3206 |
Symbol | |
ID | 8138558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 3718594 |
End bp | 3719907 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644870811 |
Product | type II secretion system protein E |
Protein accession | YP_003022991 |
Protein GI | 253701802 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 0.235983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCTCG ATGGTATCAA GCCTCAGGCG GTGCAGGGTC CGGCGGCGAC GGAATCGGAA CTCTTCAAGG AGATGAAGAC CCGGATCCAC CGCCGCCTGA TCGACAGCAT CGACCTCGCC AAGATGGACC TGATGCGCAA CAGCGAGATG GTGAGCCAGA TCCGCGGCGT GATAGAGAAC CTCATCGTCG GCGAGGGGAT CCCGCTGAAC CAGATGGAGA GGGACCGGCT GGTACTGGAG ATCCAGCACG AGACCTTCGG CCTCGGGCCG CTCGAGCCCC TTCTGGCCGA CGACGACATC TCCGACATCC TGGTGAACGA CAGCTCCAAC GTCTACATCG AGAAAGGGGG GAAGCTGCAA AAGACCGAGG TCTGTTTCCG GGACAACGCG CACCTGATGC AGATCATCGA GCGCATCGTC TCCAAGATCG GGAGAAGGAT CGACGAGTCC TCCCCCTACG TCGACGCGAG GCTCCCCGAC GGCTCCCGCG TGAACGCCAT CATCCCTCCC CTGGCGCTGA ACGGCCCCGT GCTCTCCATC AGGCGCTTCG GCCTGGAGCC GCTGGTCATG AGGGACCTGC TCAAGCTGCA GGCCCTGGAT CAGAGGATGG CGGAGCTTTT GGAGGCGGCG GTGCAGACCA GGCTCAACAT CCTGATCTCC GGGGGGACCG GCACCGGCAA GACCACCCTC TTGAACGTCC TCTCCGCCTT CATCCCGGGG GGGGAGCGGC TCATCACCAT CGAGGATTCG GCCGAGCTGC ACCTGAAGCA GGAGCACGTG GTGCGGCTGG AGACCAGGCC CCCCAACCTG GAGGGGCGCG GCGAGGTGAC CTCGCGGGAC CTGCTGAAAA ACGCCCTGAG GATGCGGCCG GACCGGATCA TCATCGGCGA GGTGCGCGGC GGCGAGGCGC TCGACCTGCT GCAGGCGATG AATACCGGCC ACGACGGCTC GCTCTCCACG GTCCACGCCA ACACCACCCG CGACGCCCTC TCCCGCCTGG AGACCATGGT GCTGATGGCC GGGCTGGACC TCCCGGAGAG GGCCATCAAG GAGCAGATGG CCTCGGCCCT CGACCTGGTG GTGCAACTGG TCCGCTTCTC GGACGGGACC CGGAAGGTCG TGAAACTCTC CGAGGTGACC GGGATGGAGG GAAACACCAT CGTCATGCAC GACGTCATCG TGTTCCAGCA AAAGGGGATC GACCGGCAAG GGAACGTGAT CGGCGAATTC CGCGCCACTG GGGTGAGGCC GCGTTTCGCC GAGCGCTTCA AGCTCTTCGG ATTCGAGCTA CCCGCCATTA TGTTCGAGAA CTAG
|
Protein sequence | MLLDGIKPQA VQGPAATESE LFKEMKTRIH RRLIDSIDLA KMDLMRNSEM VSQIRGVIEN LIVGEGIPLN QMERDRLVLE IQHETFGLGP LEPLLADDDI SDILVNDSSN VYIEKGGKLQ KTEVCFRDNA HLMQIIERIV SKIGRRIDES SPYVDARLPD GSRVNAIIPP LALNGPVLSI RRFGLEPLVM RDLLKLQALD QRMAELLEAA VQTRLNILIS GGTGTGKTTL LNVLSAFIPG GERLITIEDS AELHLKQEHV VRLETRPPNL EGRGEVTSRD LLKNALRMRP DRIIIGEVRG GEALDLLQAM NTGHDGSLST VHANTTRDAL SRLETMVLMA GLDLPERAIK EQMASALDLV VQLVRFSDGT RKVVKLSEVT GMEGNTIVMH DVIVFQQKGI DRQGNVIGEF RATGVRPRFA ERFKLFGFEL PAIMFEN
|
| |