Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3179 |
Symbol | |
ID | 8138531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3687318 |
End bp | 3688880 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644870784 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003022964 |
Protein GI | 253701775 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 110 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCTG CGGTACACAA CCTCTTAGAA AACAGCGCAA GGATTCGCCC CGACAAACTC GCCATGGTGC AGGGGGACCT GCGCATCACC TACCGCCAGG CGAACACCCG TGCCAACCGG GTTGCCGGCT GGCTCATCGA TGAAGGTGTA CTTCCAGGCG AGCGAGTGGT CATGCTGCTT AAAAACGGCA TCGAGTACCT GGCGAGTTAC TACGGGATTC TCAAGGCCGG GGCGGTCGCG GTGCCGCTGA ACTGCGATCT GCGGGTTGAC GCGCTTCGTG AACTCCTGGC CGACCTGCAC CCCGTCGCCG TGATCTGCGG CAGTGAAGGC GAACAACTCT TGAATGGAAT CGACAGTGAC CTCTTCGGAC TTCGACTCAT GCTGATCAAG GACGCGAGCG GCTCCCGTCC CCCCCGGCGT GTCAGGGTCT TTGTCTGGGA CGAGGTAGTG ACCGACGCCG ATCTTCCCGA TCACGGCCTC GACACCAACG CCTCCGCCCT CGCCAGCATC GTCTACACCT CCGGGTCGAC CGGCGCCCCG AAAGGGGTCA TGCTCTCCCA CCGCAACATC GTCAGCAACA CCTGCTCCAT CATCCAATAC CTCGGGTTGA ACGAGAACGA CGTCCAGATG GTGGTGCTCC CCTTTTTCTA CGTGATGGGG AAATCGCTTC TGAACACGCA CGTGGCGGTG GGCGGAACCG TGGTCGTCAA CAACGAGTTC GCCTACAGCG CGCCGGTGAT AAGGCAGATG GCGCAGGAAG GAGTGACCGG CTTTTCGGGG GTCCCTTCCA CCTACGCTTA CCTGTTGCAC CGGTCGCCAT TGGCGGCTTT CCGGGACAAG CTCCCGGCGC TGCGCTACTG CACCCAGGCC GGAGGGCACA TGGCGCGTGA CATCAAGCAG AGGCTCCTGG AGGTGCTCCC GCCGCACACA AGGCTCTACA TCATGTACGG CGCCACCGAG GCGGCTGCCC GGCTTACCTA TGTCGAGCCG GAACTGCTTG CCGAGAAGAT CAATTCCATC GGCAGGGCCA TTCCAGGAGT AACCGTCCGG GTCCTGGACG AGAAGGGGGA AGAAGTCGCC GAGGGGGAAA TCGGCGAACT GGTGGCCTCC GGGTCGAACA TCATGCTGGG GTACTGGAAG GACGAGATCG CCACCGGGAG GGTTCTTGAC GCGAACGGCT ACCACACCGG CGATATGGGG TACCGCGACG GGGACGGTTA CCTATATGTG ACCGGAAGAA AGGATCATCT GCTCAAGGTG GGAGGGCACC GCCTCGACCC CCAGGAGATA GAGGACGCGC TGATGGCGAC CGGGGAACTC CTTGAGGTGG CGGTACTGGG TGTGGATGAC CACCTGTTGG GTAAAAAGCT CGTGGCGATC GCGGTGTCGC TCCAGGAAAA CCCAAGCGAC AAGGTGCTCC TCTCCCGCTG TCTGTCCAGG CTCCCACGGC ACAAAATCCC CTCGGAGATC AGGTTCGTCG CGGCGCTCCC CAAATACGCC AGCGGCAAGA TAGACCGCGC CGCCTGTTTA GAGGCGCCAC CCCTGGCCGG CGCCAAGTTG TAG
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Protein sequence | MEPAVHNLLE NSARIRPDKL AMVQGDLRIT YRQANTRANR VAGWLIDEGV LPGERVVMLL KNGIEYLASY YGILKAGAVA VPLNCDLRVD ALRELLADLH PVAVICGSEG EQLLNGIDSD LFGLRLMLIK DASGSRPPRR VRVFVWDEVV TDADLPDHGL DTNASALASI VYTSGSTGAP KGVMLSHRNI VSNTCSIIQY LGLNENDVQM VVLPFFYVMG KSLLNTHVAV GGTVVVNNEF AYSAPVIRQM AQEGVTGFSG VPSTYAYLLH RSPLAAFRDK LPALRYCTQA GGHMARDIKQ RLLEVLPPHT RLYIMYGATE AAARLTYVEP ELLAEKINSI GRAIPGVTVR VLDEKGEEVA EGEIGELVAS GSNIMLGYWK DEIATGRVLD ANGYHTGDMG YRDGDGYLYV TGRKDHLLKV GGHRLDPQEI EDALMATGEL LEVAVLGVDD HLLGKKLVAI AVSLQENPSD KVLLSRCLSR LPRHKIPSEI RFVAALPKYA SGKIDRAACL EAPPLAGAKL
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