| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_3163 |
|---|
| Symbol | |
|---|
| ID | 8138515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3674220 |
|---|
| End bp | 3675548 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644870768 |
|---|
| Product | cytochrome C family protein |
|---|
| Protein accession | YP_003022948 |
|---|
| Protein GI | 253701759 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 121 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGT TCGGCTTAAT GACTATCTTT TCCCTGAGCG CGCTGCTTAC GGCATGGTCG
CCGGCTTTCG CCGACAGTTG CCTTACCGCA GGGTGCCACC AGCCGATATC GGGAATGAAA
GCGCAGCATG ACCCGGTCAA GGGAGGCGAC TGTCTTTCCT GCCATGTCAG CCAATCGGCG
AACCACCCCA CCCCCGGGGC GAAAGGGTTC AAGCTCACCG CCTCCGGCGC CGCCCTCTGC
AGCCAGTGCC ACACCCCTTA CGGGAAGAAG AAGACAGTGC ATGCGCCGGT CAAGGAGGGT
GAGTGCACCG CCTGCCACAA CCCGCATGGC GCCGACGGCC GCTACCTCAT CAACGCTAGC
GACGACCAGA CCGGGCTCTG CATGGCATGC CACGATTCCG CCATGATCAA GCACAAATAC
ATGCACGGCC CCGTAGCGGT GGGCGCCTGC ACCAAATGCC ACGATCCGCA CGAGTCCAAC
GGCAAGGGCC TGATCAAAGG GAGCGTGCGC GAAAGCTGCC TCGGCTGCCA TGCCGACTTT
GCCGCCTCCT TCCAGACCGC ACAGGTGGTG CACCCGCCGG TCAAAAACGA TCCCTGCACC
CTTTGCCACG ATCCTCATGG CTCTGCCGTT CCCTTCATGC TCAGCAAGAA GATGCCGGAT
CTCTGCATCG GCTGCCACAG CGGGCTGGCG AAGAAACTCA CCGCCAAGGT CACCCACAAG
CCGCTGCTGC AGGAGGCCGG GTGCGGCAGT TGCCACTCCG CCCACTTCGC CAAGGCCAAG
GGGCTTCTCC CCTTCGACGA GGTGACTACC TGCCTCTCCT GTCACGACAA GGACAACCTC
GGCAAGCCGG CTCTGCGCAA CATCAAGAAG GAGATGGCCG GCAAGAAGTA CCTGCACGGT
CCGGTCGCAA AGGGGGAGTG CAAGGCCTGC CACGACCCGC ACGGCTCCGA CAACTTCCGT
CTGCTCAAAG GGGCATACCC GTCGACACTG TACGTGCCGT ACCAGGAAGG GATCTACGAT
GCCTGCCTCA ACTGCCACGA GAAGAACCTG CTCCGTTTCG CGGACACCAC GATCTATACC
AACTTCAGGA ACGGGAACCG GAACCTCCAC TACGTCCATG TGGTTAACAA CCGCAAAGGG
CGTAGCTGCC GCATCTGCCA CGACGTCCAC GCAAGCGACG GCCAGAAGTT GATCACCAAG
ACCGGGGCCA AGTTCGGAGA CTGGAAGATT CCGACCAACT TCAAAATGAC CGAAACCGGA
GGGAGTTGCG CTCCGGGATG CCACCGCGAA CTCTCGTACG ACCGCAAGAG CGCGGTGTCT
TACAAGTGA
|
|---|
| Protein sequence | MRKFGLMTIF SLSALLTAWS PAFADSCLTA GCHQPISGMK AQHDPVKGGD CLSCHVSQSA
NHPTPGAKGF KLTASGAALC SQCHTPYGKK KTVHAPVKEG ECTACHNPHG ADGRYLINAS
DDQTGLCMAC HDSAMIKHKY MHGPVAVGAC TKCHDPHESN GKGLIKGSVR ESCLGCHADF
AASFQTAQVV HPPVKNDPCT LCHDPHGSAV PFMLSKKMPD LCIGCHSGLA KKLTAKVTHK
PLLQEAGCGS CHSAHFAKAK GLLPFDEVTT CLSCHDKDNL GKPALRNIKK EMAGKKYLHG
PVAKGECKAC HDPHGSDNFR LLKGAYPSTL YVPYQEGIYD ACLNCHEKNL LRFADTTIYT
NFRNGNRNLH YVHVVNNRKG RSCRICHDVH ASDGQKLITK TGAKFGDWKI PTNFKMTETG
GSCAPGCHRE LSYDRKSAVS YK
|
|---|
| |