Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3054 |
Symbol | |
ID | 8138400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3542354 |
End bp | 3544534 |
Gene Length | 2181 bp |
Protein Length | 726 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644870654 |
Product | helicase, RecD/TraA family |
Protein accession | YP_003022840 |
Protein GI | 253701651 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 114 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGA CACCCCCAAC CGAAAACGTC GACAGGCTCT CGGGCTCGCT GGAGAGGGTC ACCTTCCACA GCGAGGAGAC CGGATTCTGC GTGCTGCGGG TGAAGGTTGC CGGGCAGCGC GACCTGGTGA CGGTGACCGG CGCCGCGGCC TCGGTGACGC CGGGGGAGTA CCTTGAGTGC ACCGGTTCCT GGCACAACGA CCGGACCCAC GGCATGCAGT TCAAGGCCGG GCACATCAAG GTGGTCCCCC CCACCACCCT GGAAGGGATC GAGAAGTACC TGGGAAGCGG GATGGTGCAC GGCATCGGGG CCCACTTCGC CAAGGTGCTG GTGAAATCGT TCGACGCGGC CGTCTTCGAC GTCATCGAGA ACCACCCGGA AAGGCTCCTG GAGCTTCCGG GGATCGGCCG CAAGCGGATG GAATCGGTCG CCGGCGCCTG GGTGGAGCAA AAGGCGATCC GCGAGATCAT GGTGTTCCTG CAGTCCAACG GCCTTGGGAC CGCCCGGGCC GTGAGGATCT ACAAGAGCTA CGGCAACGAG GCGATCTTCA AGGTGACCGA GAACCCGTAC CGGCTGGCCC TGGAGATCCA CGGCATAGGG TTCAAGACCG CCGACCTCTT GGCTGCGAAG CTCGGGATAG CGCCCGATTC CATGATCCGG GCCCAGGCGG GGGTGCGGCA TGTGCTGCAG GAGATGTCGA CCAGCGGCCA CTGCGCCGCA CTCAGGGCGG AACTGGCCGA AAGCACCGCA AGTTTGCTGG AGATCCCTCA ACCGGTGATA GAGTCCGCCA TCGAGGCGGA GCTCGCCGCG GAGAACCTGG TCGCCGACCA GATCTCCGGC TCCCCCTGCG TCTTCCTCGC GCCGCTCTAC AAGGCGGAGG TAGGCGTGGC CTCCGGTATT TGCCGCCTTC GCGCCGGCAC GCCCCCCTGG GGGGGCATCG TCGCCGAAGA GGCGATTCCC TGGGTGGAGA GCCAAAAAGG GATCACCCTT TCCGCCTCGC AGCGCGACGC CATTCGGCTC GCCCTCAAGA GCAAGGTGGT CGTGGTGACC GGCGGGCCGG GGGTGGGTAA GACCACGCTG GTCAACAGCA TCCTCGGCGT CATCGGCAGA AGGCCGCTCC GGGTCACCCT ATGCGCCCCG ACCGGGAGGG CCGCGAAGCG CCTCGCCGAG TCGACCGGGA TGGAGGCGAA GACCATTCAC CGGCTGCTGG AGTTCGATCC GCAGAGTTTC GGTTTCAAGC GCTGCAAGGA GAACCCGCTT CACACCGACC TCCTGGTCAT GGACGAGGCG TCCATGGTCG ACGTCGTGCT GATGAACAAG CTCCTTCCCG CCATTCCCGA CCATGCCGGC CTCATCATCG TGGGGGATGT GGACCAACTC CCGTCGGTGG GGCCGGGGTC CGTTTTATCC GACATCATCG AGTCCGGCGC GGTCCCCACG GTGCGGCTCA CCGAGATCTT CCGGCAGGCC GCCGGTTCCA GGATCATCGT CAACGCCCAC CGCATCAATC GCGGCGAATT GCCGCTGAAG GACGAGGGGA AGGAGCTCGC CGACTTCTAC TTCATACCGG CGGCGACGCC CGAGGACATC CACGACAAGC TCCTGCAGGT CGTCAGGGAG CGGATCCCCA AGCGTTTCGG CTTCGATCCC GTGCGCGAGG TCCAGGTGCT CACGCCGATG AACCGGGGGG GGCTCGGGAC CAGGTCCCTC AACGCAGAGT TGCAGGGGGT GCTGAACGGC AGGGGCGAGC CGAAGGTGGA GCGCTTCGGC ACCAGCTACG CCCCCGGGGA CAAGGTGATC CAGACGGTGA ACAACTACGA GAAGGAGGTC TTCAACGGGG ACATCGGACG CATCGTCGAG ATCCGCCCGG AAGAAGGCGC ACTCACCGTG GACTTCGATG ACCGGCTGGT GGAATATGCG TTCGCCGAAT TGGACGAGGT GAGTCTCGCC TACGCCACCA GCATCCACAA GAGCCAGGGG TCCGAATACA CCGCCGTGGT GATCCCGCTT GCGATGCAGC ACTACACCAT GCTGGAGCGA AACCTCCTTT ACACCGCCGT CACCCGCGGC AAAAAGCTCG TGGTGGTGAT CGGCGAGCAG AAGGCGCTCG CCATGGCGGT GCAAAACCAG AAGTCCCACC GCCGCCTGAC CAGGCTGGCG GGGAGGATAG CTCTCACGTA G
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Protein sequence | MKETPPTENV DRLSGSLERV TFHSEETGFC VLRVKVAGQR DLVTVTGAAA SVTPGEYLEC TGSWHNDRTH GMQFKAGHIK VVPPTTLEGI EKYLGSGMVH GIGAHFAKVL VKSFDAAVFD VIENHPERLL ELPGIGRKRM ESVAGAWVEQ KAIREIMVFL QSNGLGTARA VRIYKSYGNE AIFKVTENPY RLALEIHGIG FKTADLLAAK LGIAPDSMIR AQAGVRHVLQ EMSTSGHCAA LRAELAESTA SLLEIPQPVI ESAIEAELAA ENLVADQISG SPCVFLAPLY KAEVGVASGI CRLRAGTPPW GGIVAEEAIP WVESQKGITL SASQRDAIRL ALKSKVVVVT GGPGVGKTTL VNSILGVIGR RPLRVTLCAP TGRAAKRLAE STGMEAKTIH RLLEFDPQSF GFKRCKENPL HTDLLVMDEA SMVDVVLMNK LLPAIPDHAG LIIVGDVDQL PSVGPGSVLS DIIESGAVPT VRLTEIFRQA AGSRIIVNAH RINRGELPLK DEGKELADFY FIPAATPEDI HDKLLQVVRE RIPKRFGFDP VREVQVLTPM NRGGLGTRSL NAELQGVLNG RGEPKVERFG TSYAPGDKVI QTVNNYEKEV FNGDIGRIVE IRPEEGALTV DFDDRLVEYA FAELDEVSLA YATSIHKSQG SEYTAVVIPL AMQHYTMLER NLLYTAVTRG KKLVVVIGEQ KALAMAVQNQ KSHRRLTRLA GRIALT
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