Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_3010 |
Symbol | clpX |
ID | 8138356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3497592 |
End bp | 3498845 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644870611 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_003022797 |
Protein GI | 253701608 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAGAA GAGATGACCG TTCCGACACG CTGATCTGTT CCTTTTGCGG GAAGAGCCAG GAAGAGGTGA AGAAGCTGAT TGCGGGGCCT ACGGTCTACA TCTGCGACGA GTGCATCGAG CTTTGCAACG ACATCATCGC GGAGGAGTCC AAACTGGAGG ATGCCACCGC AACCGATGTG AGGAAACTTC CCAAGCCGCA GGAAATCAAG GAAGTCCTCG ATGAATACGT GATCGGCCAG TCCAGGGCGA AAAAGGTCCT GGCCGTAGCC GTGTACAACC ATTACAAGAG GGTCGAGGCC GCGGTGAAGC CGGGCGACGT CGAGATGCAG AAGAGCAACA TCCTGCTTCT GGGCCCAACA GGCAGCGGCA AAACGCTCCT GGCGCAGACC CTGGCCCGCA TCCTCAAGGT GCCTTTCGCC ATGGCGGACG CCACCAACTT GACCGAGGCG GGTTACGTCG GCGAGGACGT GGAGAACATC ATCCTGACCC TCTTGCAGGC GTCCGATTAC GACGTGGAGA AGGCGCAGAA GGGGATCATC TACATCGACG AGATCGACAA GATCGCCAGG AAATCCGACT CGCCCTCCAT CACCCGCGAC GTTTCGGGCG AGGGGGTGCA GCAGGCCCTT TTGAAGATCA TCGAAGGGAC CGTGGCGAGC GTCCCCCCCA AGGGTGGGCG CAAGCACCCG CAGCAGGAGT TCCTTAAGGT GGACACCACC AACATCCTGT TCATCTGCGG CGGGGCCTTC CCCGGGTTGG ACAGCATCAT CCAGCAGAGG ATCGGGGTCA AGACGCTCGG CTTCGGCGCG GACGTCAAGA AGAAGGTGGA GAAGAAGGCG GGCGAACTGC TGGCCGGGGT GACCCCTGAG GATCTCTTGA AGTTCGGTTT CATCCCCGAG TTCGTGGGGC GTCTTCCCAT GCTCGCCTCG CTCTCCGAGC TCGACGAGGA GGCGATGGTC CAGATCCTCA AGGAGCCGAA GAACGCGCTG ATCAAGCAGT ACCAGAAGCT GTTCGATATG GAGCACGTGA AGCTGAAGTT CACCGACGGC TCCCTGGTCG CCATAGCACG CGAGGCCCTG AAGCGAAAGA CCGGCGCCCG CGGCCTGCGC TCCATCCTGG AAAACGCGAT GCTGGACATC ATGTACGAGA TCCCCTCCCA GAGCATGGTG AAGGAAGTGG TCATCAACGA AGAGGTGATC TACAGCAAGG AAAAGCCGAT CATCGTCTAC GAGAACGTGG CGGAAAGCGC CTGA
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Protein sequence | MSRRDDRSDT LICSFCGKSQ EEVKKLIAGP TVYICDECIE LCNDIIAEES KLEDATATDV RKLPKPQEIK EVLDEYVIGQ SRAKKVLAVA VYNHYKRVEA AVKPGDVEMQ KSNILLLGPT GSGKTLLAQT LARILKVPFA MADATNLTEA GYVGEDVENI ILTLLQASDY DVEKAQKGII YIDEIDKIAR KSDSPSITRD VSGEGVQQAL LKIIEGTVAS VPPKGGRKHP QQEFLKVDTT NILFICGGAF PGLDSIIQQR IGVKTLGFGA DVKKKVEKKA GELLAGVTPE DLLKFGFIPE FVGRLPMLAS LSELDEEAMV QILKEPKNAL IKQYQKLFDM EHVKLKFTDG SLVAIAREAL KRKTGARGLR SILENAMLDI MYEIPSQSMV KEVVINEEVI YSKEKPIIVY ENVAESA
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