Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2940 |
Symbol | |
ID | 8138283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3419292 |
End bp | 3420383 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644870538 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_003022727 |
Protein GI | 253701538 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 120 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAAC CGTTACGCAT AGGAAAACAC GAGGCACGCT ACCCGCTCAT CCAGGGCGGC ATGGGGGTGC GCATTTCTGC AGGATCTCTC GCAGGGCACG TAGCGAAGTG CGGAGGGGTC GGCCTTGTCG CTTCACCCGG CATCGTCTTG AACAGCGAGT TTTTCAACGG TTCGAACTAT CTCAAGAACA GCTCCCTCGC TCTCAAGGAG GAGCTGCGCA AGGCCTACGA GATCGCGCCC GACGGCATCG TCGGCGTGAA CGTGATGGTC GCCCTCACCG ATTTCGAGGA ACTGGTCGTC GCCGCCGTCG AGGGTGGCGC CAAGGTGCTC GTCTGCGGGG CGGGACTCCC CTTGACCTTG CCGGGACTGA CCGCGCACGC TCCCGACGTG GCGCTGGTGC CGATCGTTTC CTCCGTGCGC GCGGCGCAAC TGATCGCCAA AAAATGGGAC AAGTCCTACA ACCGTCTCCC CGACGCCGTG GTGGTAGAGG ATCCCGACAC CGCCGGGGGG CATCTGGGCG AAAAGATAGA AAATATCGGC AACGGCGACT ATGACCAGTA CGAGACCGTG CGCGGCGTCA AGGAATTCTT CCGTACCGAG TACAACCTCG ACATCCCCAT CATCGCCGCC GGCGGGATCT GGGACCGCGC CGACGTGCTG CACGCCCTTG CCGAAGGGGC GGACGGTGTG CAGATGGCGA GCCGTTTCGT AACCACCGTG GAGTGCGACG CGGACGACGC CTTCAAGCAG GCCTACCTGG ACTGCAAGAA GGAGGACATC GGTCTCATCA TGAGCCCGGC GGGTCTTCCG GGGCGCGCCA TTCTCACCAA CCAGCAGGGG ATCGTCGACT ACGACCGGGA TCGTGCCTCC TCCTGCAGCC ACGGCTGCCT GAAAAAGTGC TCCTACAAGG AAAGCGGAGA GCGTTTCTGC ATCGTCAGGT CCCTGGACCG GGCGCAGCGC GGCGAGGTTG ACAGCGGCCT GATCTTCTGC GGCACCAACG CCTATAAGGC CAACCGTATC GAGACCGTCC AGGAGATCTT CGACGAGCTC TTCGCCGAAA CGGGCGCCGT CTCCCACGAG AAAGCCGCGT AA
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Protein sequence | MFKPLRIGKH EARYPLIQGG MGVRISAGSL AGHVAKCGGV GLVASPGIVL NSEFFNGSNY LKNSSLALKE ELRKAYEIAP DGIVGVNVMV ALTDFEELVV AAVEGGAKVL VCGAGLPLTL PGLTAHAPDV ALVPIVSSVR AAQLIAKKWD KSYNRLPDAV VVEDPDTAGG HLGEKIENIG NGDYDQYETV RGVKEFFRTE YNLDIPIIAA GGIWDRADVL HALAEGADGV QMASRFVTTV ECDADDAFKQ AYLDCKKEDI GLIMSPAGLP GRAILTNQQG IVDYDRDRAS SCSHGCLKKC SYKESGERFC IVRSLDRAQR GEVDSGLIFC GTNAYKANRI ETVQEIFDEL FAETGAVSHE KAA
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