| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2869 |
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| Symbol | |
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| ID | 8138212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 3340219 |
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| End bp | 3342165 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644870470 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_003022659 |
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| Protein GI | 253701470 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 0.990966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGT CGAGCGATCC TGCTGCGGAG TTTTTCCTGG GCAAATTCAG TAATCTGGAA
CAGCTGTTCG GTCAGGCCCA GTTCGGTGTC TCCATCATGG ACTGCGACCT GCGCTACGTC
TACGTCAATG ACCGGATGGC GTCGATCAAC GCTTTGCCCC CCAAAGAGCA CCTGGGGAAG
ACGGTAAGGG GGGTTGACCC CGCCGTCGCC ATGGTGGTCG AGCCCTTGCT GAACCGAACC
ATCCACGAGG ATCAATCCTT CGTGGACCTT GAGATACGGA TTTCGAAACC GGGGGAACCC
CAGCAACGAT CTTGGTTGAT ATGCTCGTAT CCCCTCAAGG AAAGCGACGG TTCCGTGACC
CGCTGCGGGC TGGTGGTCCA GGACATAACC GAGCAGAAGA TAAGGCAGAG CCTGCAGGCT
GAGCGGCTGC AGGTAGAGGC GTTCCTCTCC AACCTCTCCT CCGCTTTTAT CAACGTGTCG
GTGAGCGATG TGGATCGCAA GATAGAAAAA GGTTTGCAAA AGGTCGTCAA TTTCCTCGGC
TTCGAAAGAA GCAGCATCTG GCACTTCACA CCTGATCGTA GCAGTTTGCG CATCACCCAT
TCCTACGCGC TGCCCGGCGT CAAACAACCT CCCGCAGAAC TGATGAACCT GATCCCGGTC
TGGATCGACA TGATCATGGT GGGAGAGATC TTCCGTATTT CCGACGTTGA GGAATTGCCG
GACAGGTTTT GGAGGGAAAA GCAGTATTGC AGGGACCAGG GCGGCATCAA ATCCATCATG
TTCATCCCCG CCAGCGTCGG CGGCACCATA GTCGGCGCCA TCACCTTCGT TTCCTACAGC
ATCAAGAAAG AGTGGCCCGA TGAGCTGACT CAGAGACTGC GCCTATTATG GGAGATTTTC
GCCAACGCCC TCGAGCGCAA AAGGGCCGAT CAGAAAATAC AGAACGCCTT GGCTGAGATA
CGGCAGCTAA AGGACCGTCT TGAGGCGGAA AACGTCTATC TGCGCGACCA GATCGACGTG
GAATACAAGC ACGAGGAGAT CATCGGCAAG TCGGTGGCCG TTCGCAACGT GCTGCAGCAG
ATTCAACAGG TGGCACCTAC CGATTCCACC GTCCTCATCC TGGGCGAAAC CGGCACCGGG
AAGGAACTGA TAGCGAGGGC CATCCACAAC GCCGGCCAGC GCAAGGCCCG CGCCATGATC
AAGGTGAACT GCGCCGCGTT GCCGGCAGCT CTCATCGAGG CTGAGCTGTT CGGTCATGAA
AAAGGGGCCT ATACCGGAGC CGTATCCTCC CAGATCGGGC GCTTCGAGGC CGCTAACGGC
TCGTCCATCT TCCTGGACGA GATAGGGGAG CTCCCCCTGG AGCTTCAGTC GAAGCTGCTG
CGGGTCATCC AAGAAGGGCA GTTCGAGCGG CTGGGAAATC CAAAGCCGGT CAAGGTGGAC
GTGAGGGTGA TCGCCGCGAC CAACGTGAGC CTGGCGCAGG CAGTAAAGGA AGGGAAATTC
CGGCAGGATC TCTATTACAG GCTTAACGTC TTCCCCATCT TTGTCCCTCC GCTGCGTGAC
CGGCATGAGG ACATACCCCT CTTGGTGTGG GCGATGGTGG AGGAGTTCTC CAAGGTTTTC
GGCAAGACTA TCGAGCGCAT CCCCAGAAGA AATATGGAGG TCATGGAGCG CTACAGTTGG
CCGGGAAACA TAAGAGAGCT GAGAAACCTG GTGGAGCGGG CCATGATCCT CAGTAACGGC
GGCACCCTGG TGGTGGACAT TCAGGACGGA TCCGCCGCGA CCGCCAACGA GCCGATGACG
ATGGAAGCCG CGGAACGAAA CCATATAGCC CTTGTATTGG AAATGACGGG CTGGCGCATT
CGCGGAAAGG GTGGAGCCGC AGAAATTCTC GACATGAAAC CCACGACGCT GCATTCCCGG
ATCAAGAAGC TCGGCGTCAG CAAATAG
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| Protein sequence | MALSSDPAAE FFLGKFSNLE QLFGQAQFGV SIMDCDLRYV YVNDRMASIN ALPPKEHLGK
TVRGVDPAVA MVVEPLLNRT IHEDQSFVDL EIRISKPGEP QQRSWLICSY PLKESDGSVT
RCGLVVQDIT EQKIRQSLQA ERLQVEAFLS NLSSAFINVS VSDVDRKIEK GLQKVVNFLG
FERSSIWHFT PDRSSLRITH SYALPGVKQP PAELMNLIPV WIDMIMVGEI FRISDVEELP
DRFWREKQYC RDQGGIKSIM FIPASVGGTI VGAITFVSYS IKKEWPDELT QRLRLLWEIF
ANALERKRAD QKIQNALAEI RQLKDRLEAE NVYLRDQIDV EYKHEEIIGK SVAVRNVLQQ
IQQVAPTDST VLILGETGTG KELIARAIHN AGQRKARAMI KVNCAALPAA LIEAELFGHE
KGAYTGAVSS QIGRFEAANG SSIFLDEIGE LPLELQSKLL RVIQEGQFER LGNPKPVKVD
VRVIAATNVS LAQAVKEGKF RQDLYYRLNV FPIFVPPLRD RHEDIPLLVW AMVEEFSKVF
GKTIERIPRR NMEVMERYSW PGNIRELRNL VERAMILSNG GTLVVDIQDG SAATANEPMT
MEAAERNHIA LVLEMTGWRI RGKGGAAEIL DMKPTTLHSR IKKLGVSK
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