| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2711 |
|---|
| Symbol | |
|---|
| ID | 8138053 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 3156676 |
|---|
| End bp | 3159132 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644870315 |
|---|
| Product | Hpt sensor hybrid histidine kinase |
|---|
| Protein accession | YP_003022505 |
|---|
| Protein GI | 253701316 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.0181892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGGCA ATCGGACCGG AAAAAGCTGC CTGAAGGCGA AGCTCATGGC GCCGCTGGTC
GCCTGCAACG CGCTGTTGGT GCTGGCGCTC GTGGCCGCGT TCGTCTGCTA CCAGCTCCGC
TATCCGGCGC TCCTCTGGCA GGGGGTGCCG TCCGACTCTT TCCGCTCGCT CTTCTTGTTT
CTCTCCGGCG CCGCGGCGCT CGCCTCGCTG GGACTGGGCG TCTTGGCCCT ACTCCTGTCA
CTGCGCATCA AACGGTTCAT CTCGGACCCC ATCCACCGGC TCAGCAAGAA AATGGAAATC
GTCTCCCACA GCCAGGACTA TCAGGTTCGC GTGGAAGAAG GCAGCAACGA CGAATTGGGG
CTTCTCTTCG GCTGCTTCAA CGAGATGCTG GAGGAGATCT CCATCCGCGA CGAGCGGCTC
GCGCTCCATT CGGAGGAACT GAAGCTGGAG GTGGCCGAGC GGACTGACGA GCTCTCCAGC
GTGAACCGGC AGTTGGAGGA GAGCCTGGAA GAGGTGCGGC GGGCCATGGA GTCGGCCCAG
TCAGCCAACC GCGCCAAGTC CGATTTCCTG GCGCAGATGA GCCACGAGAT CAGGACCCCG
ATGTACGGCG TGCTCGGGAT GACCGAGCTG CTCCTGAACA CCGACCTCTC CAAGGAGCAG
GCCCGCTTCG TGGAGTCGGT GCGCCGCTCG GGCGAGGCGC TTTTGGGAAT CATCAACAAC
ATACTCGACT TTTCCAAGAT CGAGGCGGGG CGGATGGAGC TGGAGACGAT CCCCTTCGAC
CTGCATCAAT TAGCGGCGGA CGCGGTGGCG ATGTTCGCCG AGGACGCGGC CAAGAAGGGT
ATCGCTTTGA GCTGCCGGAT CGAGCCGGGG CTCCCCGGCA TGTTCCAGGG GGATCCGGGG
CGCCTGCGCC AGGTGATGGT GAACCTCTTG GGTAACGCGG TGAAGTTCAC CCCTGAGGGT
GCCGTCACCC TTTCGGTTTC CCTGGCGCGG GAGCCCGCCC TGGTGCGGGT GACCGTCGAG
GACACCGGGA TCGGCATCTC CCGCGAGTCC CAGGAGCGGA TCTTCGACCA CTTCGCTCAG
GGGGACGAGT CGATGACCCG CAGGTACGGC GGCACCGGCT TGGGGCTCGC CATCGCGAAG
CAGCTGACCG AGCTCATGGG GGGGGTGATG GAGCTTTCCA GCGAGCCGGG TGAAGGGGCG
AGTTTCAGCT TCACCGTGGC CCTGAAGCCG CACCATAAGG CCCCGCGCCC CGAGCGCTCC
TACAGCGCGC TGCGCAGCAA GCGTGCCCTG CTCGCGTCAG ACGACCCCGA GCTGCAGGAG
ACCCTCCTGG AACTCACGGG GGGGCTGGGG ATGGATCTTG ACTGCGTCGG AGACGCGCCC
GGCGCGCTCT GCAGGCTGTT GGCCGCCCCC TTCGACCTGG TCCTCATGGA CCACTGCGTG
GCCGGGACCG ACGGCCTGGC CCTCGCCGCG ACCATCCGCA GCATCGCGGT GGGGCATTGC
GTGCGGTTGG TGCTCCTGGC CGAGGAACCG GAGGCGGCGC CGGCCGAGCG GGTGCGCGAG
ATCGAGGTGA CCCTTTTGCG AAGGACCAAC CTGACCCGGG AAGGGCTCTA TGCCGCGCTG
GCCTCGGCAC TCGGCATGGA AGAGGAGCAA GGGGAAGGGG AGGACGCGCC CACCCTGCGG
CGGCTGCGCC AGGTGCTCCT CGTCGAGGAT AACGTTGTGA ACCAGGAGGT GGGGAGAGGG
ATGCTGGAGA GCCTGGGTTG CCGGGTGAAG GTGGCGGAGA ACGGGCTTGC GGCGCTTAAG
GAGGTGCAGC GGAGGAAATA CGACCTCATC TTCATGGACT GCCAGATGCC GGTCCTGGAC
GGCCTGGGGG CGACCCGGCG CATTCGGCAG CGTGAGGAAG GTTCCTCCTC GCGCGTCCCC
ATCATCGCCC TCACGGCCTA CGCCATGAAG GGGGACCGCG AGGCCTGTCT CGCCGCCGGC
GCCGACGACT ACCTTTCCAA GCCCTTCAGC CGCGAGCAGC TCTCCAAGTC GATCGAAAGG
CGGCTTGGCT GCGGCGAGGC GAGTAGCGCG CAAGCGCGGC AGGCGGGTAT CCCGGCGGAG
ATCATCTGCC CGGAAAGAGC GGGGGGGGCG CTGGAGCTGA TCCGCACCCT GCCGGGCAAC
CGCGGCGTCG AGATCCTGCG CAAGGTGGTG GACCTCTACC TCGCCAGCAC GCCGACGCTT
CTGCAGACCA TGCGCGAGGC CGAGTCCGGC GGCGACGCCG AGAAGCTTAA GGCCGCGGCG
CACAGCTTCA AGTCGAGCAG CGCCAATCTG GGCGCGGTGA GGCTCGCCGG GGTCTGCTTG
GAGCTGGAGA GCCTTGGGCG CGCGGGGTCG ACCGAGGGGG CGGGGGCGCT GCTCGTGCAG
GTCGAGGAGG AATACCGGCT GGTTCGCGAC GCCCTCTTGG GAGGACCTTT ATGCTGA
|
|---|
| Protein sequence | MDGNRTGKSC LKAKLMAPLV ACNALLVLAL VAAFVCYQLR YPALLWQGVP SDSFRSLFLF
LSGAAALASL GLGVLALLLS LRIKRFISDP IHRLSKKMEI VSHSQDYQVR VEEGSNDELG
LLFGCFNEML EEISIRDERL ALHSEELKLE VAERTDELSS VNRQLEESLE EVRRAMESAQ
SANRAKSDFL AQMSHEIRTP MYGVLGMTEL LLNTDLSKEQ ARFVESVRRS GEALLGIINN
ILDFSKIEAG RMELETIPFD LHQLAADAVA MFAEDAAKKG IALSCRIEPG LPGMFQGDPG
RLRQVMVNLL GNAVKFTPEG AVTLSVSLAR EPALVRVTVE DTGIGISRES QERIFDHFAQ
GDESMTRRYG GTGLGLAIAK QLTELMGGVM ELSSEPGEGA SFSFTVALKP HHKAPRPERS
YSALRSKRAL LASDDPELQE TLLELTGGLG MDLDCVGDAP GALCRLLAAP FDLVLMDHCV
AGTDGLALAA TIRSIAVGHC VRLVLLAEEP EAAPAERVRE IEVTLLRRTN LTREGLYAAL
ASALGMEEEQ GEGEDAPTLR RLRQVLLVED NVVNQEVGRG MLESLGCRVK VAENGLAALK
EVQRRKYDLI FMDCQMPVLD GLGATRRIRQ REEGSSSRVP IIALTAYAMK GDREACLAAG
ADDYLSKPFS REQLSKSIER RLGCGEASSA QARQAGIPAE IICPERAGGA LELIRTLPGN
RGVEILRKVV DLYLASTPTL LQTMREAESG GDAEKLKAAA HSFKSSSANL GAVRLAGVCL
ELESLGRAGS TEGAGALLVQ VEEEYRLVRD ALLGGPLC
|
|---|
| |