Gene GM21_2682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2682 
Symbol 
ID8138024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3119708 
End bp3121078 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content64% 
IMG OID644870286 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_003022476 
Protein GI253701287 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.000000048168 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCGAGA AGAAGAAAAT ACTGGTGGTG GACGACGAGG AAAACCTGCG CCATATGCTC 
CAGGTCATGC TGAAAAAGCA GGGATACCAG GTGGAGCAGG CGGCGGACGG CGCGCAGGCA
CTGGAGAAGG CGCGACAGGG CAGCTACGCC TTCATCCTCT GCGACATCCG CATGCCGGTC
ATGGACGGCA GGGCTTTCCT GGCCGCCTGC ACCGCGGCGG GCATAAACAG CACCGTGATC
ATGATGTCGG CCTATGGCAC GCTTGAGGAT GCGGTCGGCT GCATGAAGCT CGGCGCCTAC
GACTACATCT CCAAGCCCTT CAATAGCGAC GAGATCTCGC TGGTCCTGAA AAAGGCGGAG
GAGCGCGAAA GGCTGAAAGA CGAAAACCGG AGGCTGCGCG AGGAGGTGGT GCGCCGCCGC
CCCTTGGGCG ACATCATCAG CAGAAACGAA CGCATGGCCG AGATCGGGCG GCTGGTGCTG
AAGCTCTCCG AGCACAAGAC TTCCGTGCTC ATCCTGGGAG AGTCGGGAAC CGGAAAGGAA
CTGGTCGCCC GGGCGCTGCA CTACTGCGGG TCGCGCAGGG CCGCCCCCTT CGTCGCGGTC
AACTGCGGCG CCATCCCCGA TTCGCTGCTG GAAAGCGAAC TGTTCGGGCA CGTGAAGGGC
GCCTTCACCG ACGCGAGCCA CGACAAGACG GGGCTCTTCG AGGAGGCCGA CGGCGGGACG
CTCTTTCTCG ACGAGATCTC GGAGCTCTCC CTCCCGCTTC AGGTGAAACT TTTGCGCGTG
CTGCAGGAGG AAGAGATCCG CCGGGTCGGT GCCGCAACCT CCCAGGCCGT CAACGTCCGG
GTCGTTTCGG CGACCTCGCG CGACCTAGCG CAGGAGGTGG CGGCAGGGAG ATTCCGCGAG
GATCTCTACT TCAGACTAAA CGTCTTCCCC CTCTCGCTGC CGGCTCTGCG GGACAGGATC
GAGGACGTCC CCCTCCTGGT GGACCATTTC CTGGAAAAAC ACGGGGAGAG GATGGGGATA
ACCGGCGTGC GCCCGAGCCC AGAGACGCTG CAGGCCTTGG TGCGCTATCG CTGGCCTGGG
AACGTGAGGG AGTTGGAGAA CTGCATCGAA CGCGGGCTCG TTCTCTGCGA AGCTGGCATG
CTTGGGCTGT CATGCCTTCC AGAGAGCGTG CGCCGCGGGG TCGGGATCGA GAGAAGGGCT
ACCGACATCC CCGAGTCGCT GTCGATAAAG AGGGGGGGGG AGGCGCTGGA GCGCGCGCTT
ATCGTGCGCG CCCTGGAACA GACCGCAGGC AACAGGACCC GCGCCGCCAA GCTCCTGGAG
ATAAGCCACC GGGCGCTTTT GTACAAGCTG AAGGAGTACG AGCTGGGATA G
 
Protein sequence
MTEKKKILVV DDEENLRHML QVMLKKQGYQ VEQAADGAQA LEKARQGSYA FILCDIRMPV 
MDGRAFLAAC TAAGINSTVI MMSAYGTLED AVGCMKLGAY DYISKPFNSD EISLVLKKAE
ERERLKDENR RLREEVVRRR PLGDIISRNE RMAEIGRLVL KLSEHKTSVL ILGESGTGKE
LVARALHYCG SRRAAPFVAV NCGAIPDSLL ESELFGHVKG AFTDASHDKT GLFEEADGGT
LFLDEISELS LPLQVKLLRV LQEEEIRRVG AATSQAVNVR VVSATSRDLA QEVAAGRFRE
DLYFRLNVFP LSLPALRDRI EDVPLLVDHF LEKHGERMGI TGVRPSPETL QALVRYRWPG
NVRELENCIE RGLVLCEAGM LGLSCLPESV RRGVGIERRA TDIPESLSIK RGGEALERAL
IVRALEQTAG NRTRAAKLLE ISHRALLYKL KEYELG