Gene GM21_2660 details

Gene Information

• Locus tag: GM21_2660
• Symbol: aroB
• ID: 8138002
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: -
• Start bp: 3095978
• End bp: 3097066
• Gene Length: 1089 bp
• Protein Length: 362 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 644870264
• Product: 3-dehydroquinate synthase
• Protein accession: YP_003022454
• Protein GI: 253701265
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 48
• Fosmid unclonability p-value: 0.000170461
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGATAGCTG AAAAGATCAG GGTCGCGCTC GACGAACGGA GCTACGACAT CGAAATGGGC 
GCCGGCAATC TCGACAGAAT CGGTTCCCTT TGCCGCGAAG TCGGTCTCTC CGGAACGGCG 
GCGGTGGTCA GCAACACCAC CGTGGCCCCT CTCTACTACG AAACGGTCCG CCTCTCCATG 
GAGCGTGCAG GTTATCGGGT GGTGCCGGTA ACTCTCCCGG ACGGCGAGGG GTACAAGAAC 
AGCGCCACGC TCAACCTGAT CTACGACGGC CTGGTCGACG CCTCGCTGGA CCGCGGCTCC 
TTCATCCTGG CCTTGGGCGG AGGGGTGATC GGCGACATGG CCGGGTTCGC CGCCGCTAGT 
TACCTGCGCG GCATTCCCTT CGTCCAGATC CCCACTACGC TCCTCTCCCA GGTCGACTCC 
AGTGTCGGCG GCAAGACCGG CATCAACCAT CCCCGCGGCA AGAACCTGAT CGGCTCCTTC 
TACCAGCCGA AAGCGGTACT CATCGACGTC GCCACACTCG ATACCCTCCC GGAAAGAGAG 
TTCCTGAGCG GCCTGGGAGA GATCGTCAAG TACGGTGCGG TGCTGGACGG CGGCTTTTTC 
GACTTCCTGG AACAAAACGC GAAACTGCTA TTGGCCCGCG ACAAGGAGGC CCTGATCCAG 
GCGGTCAGCC GCAGCTGCGC CATCAAGGCG AAGGTCGTGG CGGAGGACGA ACGGGAAGGG 
GGGGTGCGCG CTGTGCTGAA CTTCGGGCAC ACCCTGGGGC ACGCCGTGGA GACCCTTACC 
GGTTACACCC GCTACCTGCA CGGTGAGGCG GTAGCTATCG GCATGGTACA GGCGGCGCGG 
ATCTCCCAGC ACTACGGGTT CTGCTCACAG GCGGACCGGG AGCGCATCGA GGCTCTCATC 
GTGGCGCTTG GGCTGCCGAT AGAGCTTCCT ATCTTCCCCG CCCAGCAGTA CAGGGAGGCG 
CTCTCGCACG ACAAGAAGGT ACGCGACAAG GGGCTCTTGT TCATCTGCAA CCAGGGGATA 
GGCGCCTACC GCATGGAAAG GCTCACAGAC CTTGGGGCGC TTCTGGAGAT CTGTGGCATA 
GGAGAATGA 

 

Protein sequence

MIAEKIRVAL DERSYDIEMG AGNLDRIGSL CREVGLSGTA AVVSNTTVAP LYYETVRLSM 
ERAGYRVVPV TLPDGEGYKN SATLNLIYDG LVDASLDRGS FILALGGGVI GDMAGFAAAS 
YLRGIPFVQI PTTLLSQVDS SVGGKTGINH PRGKNLIGSF YQPKAVLIDV ATLDTLPERE 
FLSGLGEIVK YGAVLDGGFF DFLEQNAKLL LARDKEALIQ AVSRSCAIKA KVVAEDEREG 
GVRAVLNFGH TLGHAVETLT GYTRYLHGEA VAIGMVQAAR ISQHYGFCSQ ADRERIEALI 
VALGLPIELP IFPAQQYREA LSHDKKVRDK GLLFICNQGI GAYRMERLTD LGALLEICGI 
GE