Gene GM21_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2604 
Symbol 
ID8137946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp3036389 
End bp3037507 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content46% 
IMG OID644870210 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_003022400 
Protein GI253701211 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones138 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CGATTATAAC CGGAATTACA GGGCAAGACG GATCTTATCT AGCGGAGCTA 
CTTCTAGAAA AAGGTTATGA AGTCCATGGT ATCAAGCGAC GTGCTTCATC TTTTAACACT
CAGCGGGTTG ACCACATTTA TCAGGATCCG CATATAAAAG ATGCCCATTT CAAGCTTCAT
TATGGTGACT TGACCGATTC GTCAAATTTA ACGCGTATCA TGCAGGAAGT TCAACCTGAT
GAAGTCTATA ATCTTGGTGC ACAGTCTCAT GTAGCGGTCA GCTTTGAATC ACCTGAATAT
ACAGTCGAAA CAGACGGTGT CGGCACACTG CGCATACTTG AGGCTGTTCG TCTGTTGGGT
CTGGATAAAA AAACCCGTTT CTATCAGGCA TCAACCTCCG AACTGTATGG CTTAGTTCAG
GAAACACCAC AAAAAGAAAC TACACCCTTT TACCCTCGTT CTCCATACGC TGTTGCCAAA
CTGTATGCCT ATTGGATTAC AGTTAACTAT CGTGAAGCGT ACGGCATGTA TGCCTGTAAC
GGGATACTGT TTAACCATGA ATCTCCTCGG CGTGGCGAAA CTTTTGTCAC CCGCAAGATA
ACACGCGGCC TTGCCAATAT CGCACAAGGT TTGGAGCAGT GCCTATACAT GGGCAACATT
GATTCATTGC GCGATTGGGG GCATGCCAAG GATTACGTTA AGATGCAGTG GCTGATGCTG
CAACAGGATA AGCCTGAAGA CTTTGTCATA GCTACCGGTG TCCAGTATAC CGTGCGTCAG
TTTATCATCT GGACAGCGGC AGAGTTGGGT GTAACGCTAC AATTTGAAGG TGACGGAGTA
GATGAAATTG CAACGGTTAT CTCCGTTGAA GGCACTAAGG CTCCTGCGTT AAAAGTCGGT
GATATCGTAG TCAGGATTGA TCCCCGTTAC TTCCGTCCAT CTGAGGTTGA AACACTGTTG
GGTGATCCGA CAAAAGCCAA ACAAAAGCTC GGTTGGTTTC CGGAAACAAC CGTTCAAGAA
ATGTGCGCTG AAATGGTTGC TCACGATTTG GAAGAGGCTA AGCGTCATGC ACTGCTGAAA
TCTCACGGTT TCAGCGTAGC AGTCTGCACT GAGCATTGA
 
Protein sequence
MKKAIITGIT GQDGSYLAEL LLEKGYEVHG IKRRASSFNT QRVDHIYQDP HIKDAHFKLH 
YGDLTDSSNL TRIMQEVQPD EVYNLGAQSH VAVSFESPEY TVETDGVGTL RILEAVRLLG
LDKKTRFYQA STSELYGLVQ ETPQKETTPF YPRSPYAVAK LYAYWITVNY REAYGMYACN
GILFNHESPR RGETFVTRKI TRGLANIAQG LEQCLYMGNI DSLRDWGHAK DYVKMQWLML
QQDKPEDFVI ATGVQYTVRQ FIIWTAAELG VTLQFEGDGV DEIATVISVE GTKAPALKVG
DIVVRIDPRY FRPSEVETLL GDPTKAKQKL GWFPETTVQE MCAEMVAHDL EEAKRHALLK
SHGFSVAVCT EH