Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2570 |
Symbol | |
ID | 8137912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 3000744 |
End bp | 3002033 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644870178 |
Product | MiaB-like tRNA modifying enzyme |
Protein accession | YP_003022368 |
Protein GI | 253701179 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.005255 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAAGA CCATCGCCAT AACCACCCTC GGTTGCAAGA TCAACCAGTT CGAATCGGCC GCCATGACCC AGGCGCTGGA GCAAAACGGC TACAGCATGG TCCCCTTCTC GGCCAAGGCA GACATCTACG TCGTCAACAG CTGCACCGTG ACGGCGAAGA CCGACGCGGA ATCGCGCCGC CTGATCAGGC GCGCCACCCG CCTCAACCCG GAGGCGCGCG TGGTCGTCAC CGGCTGCTAC GCGCAGATGA ACGGGGAGGA ACTTTTGAAG CTGGCAGGTG TCAACCTGAT CCTCGGCAAC AGCGAGAAAA AGGACATCGT CGGTTTCCTC GAAGGGCTCG ACGACCAACC GCGGGCCGTG GTGAGCGACA TCTCGCTGGA GAAGACCGGG GAGACGGCGC CCTTGGAAAC CTTCGCCGAA CACACCCGCG CCTTCCTCCA GGTGCAAAAC GGCTGCGACG CGCGCTGCGC CTACTGCATC GTCCCCTTCG CCAGGGGGGC CAGCCGGAGC GTGGCCGTCC AGGAGGCCCT CGACGGCATG GCCGCCTTCG CCGCTCAGGG TTTCCAGGAG ATCGTCTTGA CGGGGATACA CCTGGGCGCC TACGGCCTCG ACCTGGCCCC CCCGACGGAC CTCCTCGGGC TGATGCGGAA GGCGCAGGAT CAGGGTGCGG TGCGGCGCCT GAGAATCGGA TCGGTAGAGC CGACCGAGGT GTCAAGACAA CTTATCGATT TCATGGGCAC TTCAACCATC GCCTGTCCGC ACCTGCACCT GCCGCTGCAA AGCGGCTCGG ACAGCGTCCT CTCCCGCATG AACCGCGGCT ACGATACCGC GCTCTTCGCG GAGGTGGTGC ACTCGCTCGT GTCGGCGATG CCGGAGGTCT GCATCGGCTC CGACGTCATC GCCGGGTTCC CAGGGGAAAG CGACCGGGAG TTCGACGAGA CCTACCGGTT CATCGACTCG CTACCGCTCG CGTACCTGCA TGTGTTCCCC TTCTCGCAGC GCCCGGGCAC GCCGGCGGCG ACCATGACGC CGCAGGTCAA TCCCAAGGTG ATCAAGGAGC GGGCCGAGGC GCTCAGGGTA CTGTCGGAAC GGAAGAAATC GGATTATGCG GCGGGGTTTG TGGGGCGCGA GCTTCAGGTC CTGGTGCAAA GAGGCGAGAA GGGGCTCTCC AGAAACTACC TGACCGTACT GGTCGAAGAC AGCGAAGGGC TGGTGAACCG CGAGGTAACG GTACTGGTAA CCGGGGCCAA GGGGGGGGAA CTCACGGCCC GGGTGCTTAA GGAAAGCTAG
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Protein sequence | MSKTIAITTL GCKINQFESA AMTQALEQNG YSMVPFSAKA DIYVVNSCTV TAKTDAESRR LIRRATRLNP EARVVVTGCY AQMNGEELLK LAGVNLILGN SEKKDIVGFL EGLDDQPRAV VSDISLEKTG ETAPLETFAE HTRAFLQVQN GCDARCAYCI VPFARGASRS VAVQEALDGM AAFAAQGFQE IVLTGIHLGA YGLDLAPPTD LLGLMRKAQD QGAVRRLRIG SVEPTEVSRQ LIDFMGTSTI ACPHLHLPLQ SGSDSVLSRM NRGYDTALFA EVVHSLVSAM PEVCIGSDVI AGFPGESDRE FDETYRFIDS LPLAYLHVFP FSQRPGTPAA TMTPQVNPKV IKERAEALRV LSERKKSDYA AGFVGRELQV LVQRGEKGLS RNYLTVLVED SEGLVNREVT VLVTGAKGGE LTARVLKES
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