Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2378 |
Symbol | |
ID | 8137719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2774029 |
End bp | 2776005 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644869993 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_003022184 |
Protein GI | 253700995 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 106 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGC TACTACTTCC GTTGTTGCTA ATTTCTATAC TTCTTTCTAG CTGCGCTGCA TTTAAAGTCA CAAGTGGCTT TGATGATTTA CAAGCTAACA ACTTTGATGG TGCAATTTTA AAGTGTACAC AAGCAATGGA ATCAAATGAA GAACCCAGTC TCGTCAAGAG AGACGGAAGC TATCGTACCA GTATGGAGTT TTATTCAACG ATGTGCATAG CAGCTGCCTT TTTCGGAAAA GGTGATTTTG AAAATTCAAA AAAATATTGG TTTGCAAACA TAAAGTCTTC GCCCCAAAAG GGATATATCG CCTATGCCTC ACTAGCATCG ATGTCATATA TGTCGGGGGA TCTTGAAAAA GCACACTATT ATAGCCGATT AGGAAGAGAT CTTGTAGAGT CAGAAAATTA TATAAAAGAA AATGCTAATA GCAGTTACGA TATCAATATG TGGAAAGATG GTCTTACCGC TGCAGAACAG TATTACCACA TGAGACTTGA TTTTAAAAAA ATGACTGAGG AATATGAAAA AGGAGAGTAT AAAAACGCAA TTACGATAGG AAATTCAATA ATAGATAGGG AATTTCTTGT TCACTCCGGC ACTAAAACTG TTGCTAACAA CGTCATCGCG TCTGTTGAAA AGGGCTCTTT AGACGATTTA AACGGAATTC TACCAGGGGA TAAAATTCTA GAAGTAGATG GCGTTGCTAT TGTAGACCTT AAGACATTGG CAAAAGTTGG GCAAAAACTA AGTCATAGCT ATGGATCAAC GAGCACTGCA AAAATTGAAA GGAAAGGCAG GATTATTTCC CTAACCATAC AATTAGTCTA CCCAGAAGTC GACACTGCAA AAAAACTAAT AGAAGATGCT AAAACAGCGT TGGCATCGTC GACAAAAGGG AAGAAGAAAA TAGCGGGCCC TTGGCTGAAA GTTCTTGAAC CAAAAACAGC TAGAGGCGTT AAAATTGTCG GCAATGTAAA AGCGGAGTTC CGGATATTAG GTTCTGACGT TGACTCGCTC AAAAAAGTTA CTATAAATGG ACAACTATGT AATGAACTGA ATCCAAGCTT GCTTGAGTCA ACAATGCTTC CCGGAAAGGT AATGATGTAT ACGCTTTCTT TGCCGTTATC CCAGGGAAAA AATAAATTCG ATATTGTCGC AATCAACAAT AAAGGAAAAG AAACCCTCCA AAAAATAGAA GTCAACGGGA CTGCGGCATC TTTAAATGAA TTGACGCAGT TCTATAAACA CCGTGTTGCA GTTGTTATTG GAATCAATAA ATACTATCCT TGGCCAAGCC TGGAATTTGC CGTGAACGAT GCAAAATCTA TTAAGAACAG GCTTCTTAAA ATGGGTTTTG ACAAGGTAAT TGAGTTGTAC GATACGGAAG CGACACGAGC AAGAATCATG AGAACCCTTA TGGATGACCT GCCGACTTTA ATGGGTCCAG AAGATTGCCT TTTCGTTTTT TTTGGAGGAC ATGGGGCCAC CGAAGATCTT GCTGACGGCG GAAAAGAAGG CTACATCATG CCTGTCGATG CCGATGTAAC AAATTTCCAA GGAACAGGCA TTTCAATGTC TTCTATTCAT GAAATGATTA AGCGATATAA GGCAAAACAT ATTTTATTCG TATTCGACTC ATGTTATTCC GGTTTGGGAC TGAAACGTTC AGGTGGAGTG CATACAGCAA AAATAGATGG ATTCCTAAAA AGTATGGCTC AAAAACCGAC GTCTTTAATA TTGACGGCCG GTGGAAAGAA TGAACAGGCT ACTGAGGAAA AAGGACACGG TATCTTTACT AAATCTTTTC TTGATGTTTT AGACGGAGAC GGTGTCGCCT CGCATGGTGG ATTTATCCTC GCAAGTGATA TAGCTCAGCA AGTCAGGAAA AAGGTCCACG ACAAAAGCGG CGGGAAACAA ATCCCTCAGT TCGGAATATT GGCGGGAGAA GGGGATTTTA TTTTTGAGGT CAATTGA
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Protein sequence | MKMLLLPLLL ISILLSSCAA FKVTSGFDDL QANNFDGAIL KCTQAMESNE EPSLVKRDGS YRTSMEFYST MCIAAAFFGK GDFENSKKYW FANIKSSPQK GYIAYASLAS MSYMSGDLEK AHYYSRLGRD LVESENYIKE NANSSYDINM WKDGLTAAEQ YYHMRLDFKK MTEEYEKGEY KNAITIGNSI IDREFLVHSG TKTVANNVIA SVEKGSLDDL NGILPGDKIL EVDGVAIVDL KTLAKVGQKL SHSYGSTSTA KIERKGRIIS LTIQLVYPEV DTAKKLIEDA KTALASSTKG KKKIAGPWLK VLEPKTARGV KIVGNVKAEF RILGSDVDSL KKVTINGQLC NELNPSLLES TMLPGKVMMY TLSLPLSQGK NKFDIVAINN KGKETLQKIE VNGTAASLNE LTQFYKHRVA VVIGINKYYP WPSLEFAVND AKSIKNRLLK MGFDKVIELY DTEATRARIM RTLMDDLPTL MGPEDCLFVF FGGHGATEDL ADGGKEGYIM PVDADVTNFQ GTGISMSSIH EMIKRYKAKH ILFVFDSCYS GLGLKRSGGV HTAKIDGFLK SMAQKPTSLI LTAGGKNEQA TEEKGHGIFT KSFLDVLDGD GVASHGGFIL ASDIAQQVRK KVHDKSGGKQ IPQFGILAGE GDFIFEVN
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