Gene GM21_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2378 
Symbol 
ID8137719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2774029 
End bp2776005 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content40% 
IMG OID644869993 
Productpeptidase C14 caspase catalytic subunit p20 
Protein accessionYP_003022184 
Protein GI253700995 
COG category[R] General function prediction only 
COG ID[COG4249] Uncharacterized protein containing caspase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGC TACTACTTCC GTTGTTGCTA ATTTCTATAC TTCTTTCTAG CTGCGCTGCA 
TTTAAAGTCA CAAGTGGCTT TGATGATTTA CAAGCTAACA ACTTTGATGG TGCAATTTTA
AAGTGTACAC AAGCAATGGA ATCAAATGAA GAACCCAGTC TCGTCAAGAG AGACGGAAGC
TATCGTACCA GTATGGAGTT TTATTCAACG ATGTGCATAG CAGCTGCCTT TTTCGGAAAA
GGTGATTTTG AAAATTCAAA AAAATATTGG TTTGCAAACA TAAAGTCTTC GCCCCAAAAG
GGATATATCG CCTATGCCTC ACTAGCATCG ATGTCATATA TGTCGGGGGA TCTTGAAAAA
GCACACTATT ATAGCCGATT AGGAAGAGAT CTTGTAGAGT CAGAAAATTA TATAAAAGAA
AATGCTAATA GCAGTTACGA TATCAATATG TGGAAAGATG GTCTTACCGC TGCAGAACAG
TATTACCACA TGAGACTTGA TTTTAAAAAA ATGACTGAGG AATATGAAAA AGGAGAGTAT
AAAAACGCAA TTACGATAGG AAATTCAATA ATAGATAGGG AATTTCTTGT TCACTCCGGC
ACTAAAACTG TTGCTAACAA CGTCATCGCG TCTGTTGAAA AGGGCTCTTT AGACGATTTA
AACGGAATTC TACCAGGGGA TAAAATTCTA GAAGTAGATG GCGTTGCTAT TGTAGACCTT
AAGACATTGG CAAAAGTTGG GCAAAAACTA AGTCATAGCT ATGGATCAAC GAGCACTGCA
AAAATTGAAA GGAAAGGCAG GATTATTTCC CTAACCATAC AATTAGTCTA CCCAGAAGTC
GACACTGCAA AAAAACTAAT AGAAGATGCT AAAACAGCGT TGGCATCGTC GACAAAAGGG
AAGAAGAAAA TAGCGGGCCC TTGGCTGAAA GTTCTTGAAC CAAAAACAGC TAGAGGCGTT
AAAATTGTCG GCAATGTAAA AGCGGAGTTC CGGATATTAG GTTCTGACGT TGACTCGCTC
AAAAAAGTTA CTATAAATGG ACAACTATGT AATGAACTGA ATCCAAGCTT GCTTGAGTCA
ACAATGCTTC CCGGAAAGGT AATGATGTAT ACGCTTTCTT TGCCGTTATC CCAGGGAAAA
AATAAATTCG ATATTGTCGC AATCAACAAT AAAGGAAAAG AAACCCTCCA AAAAATAGAA
GTCAACGGGA CTGCGGCATC TTTAAATGAA TTGACGCAGT TCTATAAACA CCGTGTTGCA
GTTGTTATTG GAATCAATAA ATACTATCCT TGGCCAAGCC TGGAATTTGC CGTGAACGAT
GCAAAATCTA TTAAGAACAG GCTTCTTAAA ATGGGTTTTG ACAAGGTAAT TGAGTTGTAC
GATACGGAAG CGACACGAGC AAGAATCATG AGAACCCTTA TGGATGACCT GCCGACTTTA
ATGGGTCCAG AAGATTGCCT TTTCGTTTTT TTTGGAGGAC ATGGGGCCAC CGAAGATCTT
GCTGACGGCG GAAAAGAAGG CTACATCATG CCTGTCGATG CCGATGTAAC AAATTTCCAA
GGAACAGGCA TTTCAATGTC TTCTATTCAT GAAATGATTA AGCGATATAA GGCAAAACAT
ATTTTATTCG TATTCGACTC ATGTTATTCC GGTTTGGGAC TGAAACGTTC AGGTGGAGTG
CATACAGCAA AAATAGATGG ATTCCTAAAA AGTATGGCTC AAAAACCGAC GTCTTTAATA
TTGACGGCCG GTGGAAAGAA TGAACAGGCT ACTGAGGAAA AAGGACACGG TATCTTTACT
AAATCTTTTC TTGATGTTTT AGACGGAGAC GGTGTCGCCT CGCATGGTGG ATTTATCCTC
GCAAGTGATA TAGCTCAGCA AGTCAGGAAA AAGGTCCACG ACAAAAGCGG CGGGAAACAA
ATCCCTCAGT TCGGAATATT GGCGGGAGAA GGGGATTTTA TTTTTGAGGT CAATTGA
 
Protein sequence
MKMLLLPLLL ISILLSSCAA FKVTSGFDDL QANNFDGAIL KCTQAMESNE EPSLVKRDGS 
YRTSMEFYST MCIAAAFFGK GDFENSKKYW FANIKSSPQK GYIAYASLAS MSYMSGDLEK
AHYYSRLGRD LVESENYIKE NANSSYDINM WKDGLTAAEQ YYHMRLDFKK MTEEYEKGEY
KNAITIGNSI IDREFLVHSG TKTVANNVIA SVEKGSLDDL NGILPGDKIL EVDGVAIVDL
KTLAKVGQKL SHSYGSTSTA KIERKGRIIS LTIQLVYPEV DTAKKLIEDA KTALASSTKG
KKKIAGPWLK VLEPKTARGV KIVGNVKAEF RILGSDVDSL KKVTINGQLC NELNPSLLES
TMLPGKVMMY TLSLPLSQGK NKFDIVAINN KGKETLQKIE VNGTAASLNE LTQFYKHRVA
VVIGINKYYP WPSLEFAVND AKSIKNRLLK MGFDKVIELY DTEATRARIM RTLMDDLPTL
MGPEDCLFVF FGGHGATEDL ADGGKEGYIM PVDADVTNFQ GTGISMSSIH EMIKRYKAKH
ILFVFDSCYS GLGLKRSGGV HTAKIDGFLK SMAQKPTSLI LTAGGKNEQA TEEKGHGIFT
KSFLDVLDGD GVASHGGFIL ASDIAQQVRK KVHDKSGGKQ IPQFGILAGE GDFIFEVN