Gene GM21_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGM21_2296 
Symbol 
ID8137636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sp. M21 
KingdomBacteria 
Replicon accessionNC_012918 
Strand
Start bp2674916 
End bp2675632 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content50% 
IMG OID644869911 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003022103 
Protein GI253700914 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.0366896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAG CAATCATCAT TGGCGCCAGT TCCGGGATAG GCCGCGAATT GGCCAAAATC 
CTGTCCAGGA ATCAGTACAT CGTTGGCGCC ATGGGAAGGC GCGTTCAGCT GCTCGATGAA
TTGAAACATG AAGTAGAAGG GACATTATCT GTTCAAAAGA TCGATGTGGC GGACGTTGAA
CCGGCTATGG AAACTCTGGC GAAGTTCCTG AATGACATGG GCGATGTCGA TCTCATCGTG
ATCAGTGCCG GGACAGGAGA CATCAACGAT AGTCTCAGTT GGGACTTGGA AAACGAGGCT
ATCAAGACAA ACGTCACCGG GTTTGCGGCC ATGGTTAATG TCGCCACGCA CTACTTCATG
CAAAGGGGTT CCGGGCATCT TGTAGGTATT TCATCGATAG CCTCCTTACG CGGAGGCAGA
GAATCCCCGG CATACAATGC GTCAAAGGCT TTTGAATCGA ATTACCTGGA GGGCGTTAGG
CAGAAGGTTA CAAAATCCAG TTTGCCCATT ACAATCACCG ACATAAAGCC AGGGTTCGTC
AAGACGGCAA TGGCCAAAGG AGAGGGCATT TTCTGGGCTG CAGAGCCGGA CAAAGCTGCA
AGACAGATAT TCGACGTGAT AAAACAAAAA AAGCCCAGTG CCTATATAAC TCGACGCTGG
GTACTCGTGG CCTGGTTACT GAAGTTGCTG CCGGGGTTCA TCTATGAAAG ACTGTGA
 
Protein sequence
MKRAIIIGAS SGIGRELAKI LSRNQYIVGA MGRRVQLLDE LKHEVEGTLS VQKIDVADVE 
PAMETLAKFL NDMGDVDLIV ISAGTGDIND SLSWDLENEA IKTNVTGFAA MVNVATHYFM
QRGSGHLVGI SSIASLRGGR ESPAYNASKA FESNYLEGVR QKVTKSSLPI TITDIKPGFV
KTAMAKGEGI FWAAEPDKAA RQIFDVIKQK KPSAYITRRW VLVAWLLKLL PGFIYERL