| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2168 |
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| Symbol | |
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| ID | 8137504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2530714 |
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| End bp | 2532849 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644869783 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_003021978 |
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| Protein GI | 253700789 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 125 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTGG GGCCCGACAC GCCACTGTAT AACAGCCGCA TCATAGGCTT GTTCGTGAAG
CTGCTGAGGG AAAAGTACCC CCAGGTGGAT ATCGGCGAGC TTTTGAACCA CGCCTGCATG
AAAAAATGGG AGGTTGCGGA TCCCGGGCAC TGGTTCAGTC AGCGGCAGAT CGATCTCTTC
ACCGAAAAGC TGGCACTTAT GACCGGCGAC CCCCGCATCG CCCGGGAAGC CGGGAGGTAT
GCCGCCTCGC CCGAGGGGCT GGGCTCTTTG CACGCCTTCG TTCTTGGGCT GGTAGGCCCG
GAATACCTCT TCTTCGTCAT GCACAAGCTG GCGCGCAAGT TCACCCGTTC CTCGCGCTGT
TCCTCCCGCA GGATCGGCCC GAGGGAAATC GAGGTGACCG TCACTTTCGA GCCGGGGGTG
AGCGAGAATC CCTTTCAGTG CGACAACCGC ATCGGCTACT TCGAGGCCGC CTTCCTGCTC
TTTGGTTACG ATTTCCCCCG CATACGCCAT ACCGAGTGCA TCTTCAAGGG GGGAGAGGTC
TGCCGCTACA ACATCTCGTG GAACCCTTCT CTCATCTCGC GCCTGATCGT CGCCCGCCGT
ATATCCTTGT TGCTTCTGCC GCTAAGCTCG CTGTCTTTTT TCTTCCTAGG CGGTCAATTC
TTCACCCCCG CGCTCACCTT GGCGCTCTTC GTCTACCTCC TTTTCACCTT GCTGCTGCAC
GGACAGGAGC GCAAGGCGCT TCTCTCCTCG CTGACCAGCA TGCGCAATTC CACCGACAAG
CTGCTGATCC AGACGCAGGA CAACTGCGAC AACGCCCAGA TGATCAACGA GATCGGCGAG
GTGCTCTCCA CGAGGACCGA TCTCGACGAC ATCCTGAAGA GCGTGAACCA GGTGCTTCTG
AAAAGGCTCG ATTACGGCCG GGGCATCATC TTCCTTTTTG ATCAGGACCG GGAAGCCTTG
GTATTGAAAG GGTGTTTCGG ATTCAGCGAG GAGCACCGGC TAAAGCTTGC GCAGATGGTG
CTTCCCATTG CCAGCAGCAC GCCCCACGGC GTCCTGGTCC GCTGCTTCCT GCAGCAGGAG
CCGTTGTTGG TAAACGACCT GTCCGAGGTG AAGGCGCGGG CCAGCGCCGA AAACTACGCT
TTTTTCGTGG GGCTTGGGGT TAAATCCTTC ATCTGCGCTC CCATTGTCTG CGAGGGTGAG
TCGTTGGGGG TCTTCGCGGT CGACGACATG AAGCGGGGAG GGGAGCTTTT GCAAAGCGAT
CTGAACCTGA TCCAGGGCAT CGCGCCGGTG ATCGGCATAG CCATCAGGAA CGCGATGCAC
CTGGCCAACG AAAGGCGTCT CTCAGAGCAG CTCAGGAAGG CGTCGGAACT GCTGGAGCGC
CGGGTTGACG AGCGTACCTC GGAACTCTCC CACGCCAACC AGGAACTGGA GTTTCTCTAC
GATTCGGTGT CGCACGACCT GCGCACGCCG ATAAGGGTGA TCTACGGTTA CGGGGAGCTG
CTGCTGGAAA GTTACGGTCC GCAGTTGGAC GACAACGCCA AAGAGTACCT GCAATGCATC
ATAAGCGGCG GGGAAAGGAT GGAGGCGACC CTGGACCGGA TGCTGGACCT CTCCGAGATA
CGCCAGGCCC AGCTCGACCT GCAGCCGGTC GATCTGAGCC GGATCGCCCA CGGGATCATG
GCGGACCTGA GGATAGTCGA TTACAAGCGG GCCTTGACGG TGGAGATCCA GGAGGGCGTG
GTGGTGACCG GCGATGAGAA GCTTTTGACC CGCGTCCTGG AGAACCTTTT GGGGAACGCC
TGGAAGTATA CGGCCGGCAA GGATGAAAGC GCCATCTCCT TCGGCATGCG CGACGGGGTC
TGCTACGTCG CCGACAACGG GGACGGCTTC GACATGGCGC AGGCTGAAAG GCTGTTCCTG
CCCTTCCAGA GGCTGCATGG CGACAGCGAG ATCTCCGGCC ACGGCTTCGG GCTTTCCATC
GTGCGCAAGA TGATCGAGCG CATGGGCGGG CAGGTGTGGG GGGAGGGAAA GCCCGGCGGG
GGCGCGACCT TCTACTTCAC CCTCCCTGGT GCCGCCACGA CGAGCGCTTT ACCTCCGCAG
GCGCCCGCCG ATGCCGGCGA GCCCGCCGCT ATTTGA
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| Protein sequence | MALGPDTPLY NSRIIGLFVK LLREKYPQVD IGELLNHACM KKWEVADPGH WFSQRQIDLF
TEKLALMTGD PRIAREAGRY AASPEGLGSL HAFVLGLVGP EYLFFVMHKL ARKFTRSSRC
SSRRIGPREI EVTVTFEPGV SENPFQCDNR IGYFEAAFLL FGYDFPRIRH TECIFKGGEV
CRYNISWNPS LISRLIVARR ISLLLLPLSS LSFFFLGGQF FTPALTLALF VYLLFTLLLH
GQERKALLSS LTSMRNSTDK LLIQTQDNCD NAQMINEIGE VLSTRTDLDD ILKSVNQVLL
KRLDYGRGII FLFDQDREAL VLKGCFGFSE EHRLKLAQMV LPIASSTPHG VLVRCFLQQE
PLLVNDLSEV KARASAENYA FFVGLGVKSF ICAPIVCEGE SLGVFAVDDM KRGGELLQSD
LNLIQGIAPV IGIAIRNAMH LANERRLSEQ LRKASELLER RVDERTSELS HANQELEFLY
DSVSHDLRTP IRVIYGYGEL LLESYGPQLD DNAKEYLQCI ISGGERMEAT LDRMLDLSEI
RQAQLDLQPV DLSRIAHGIM ADLRIVDYKR ALTVEIQEGV VVTGDEKLLT RVLENLLGNA
WKYTAGKDES AISFGMRDGV CYVADNGDGF DMAQAERLFL PFQRLHGDSE ISGHGFGLSI
VRKMIERMGG QVWGEGKPGG GATFYFTLPG AATTSALPPQ APADAGEPAA I
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