| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_2084 |
|---|
| Symbol | |
|---|
| ID | 8137420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sp. M21 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012918 |
|---|
| Strand | - |
|---|
| Start bp | 2418215 |
|---|
| End bp | 2419030 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644869699 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_003021894 |
|---|
| Protein GI | 253700705 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 8.9278e-27 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAT TACCCGAAGT CGAAGTGACC CGGCTGGGGA TCGCAGCACA ACTGGTCGGA
GCCAGGATCG CCGCTGTCGC CGTTCACAGC CCCAAACTGC GCACCCTGGT GCCGCCGGAA
CTGCCGAGTA TTCTCGCCGG CCAGAGCATC CTTTCACTGA CCCGTCGCGG CAAGTACCTG
ATCATTACCT GCCGGCAGGG CTCCTTGCTG CTGCACCTTG GTATGACCGG GCACCTGCGC
CTGGTCCCCG CGGGCGCCGG CGCCGGCGCG CACGACCACT TCGACCTGGT GCTGGAGTCC
GGGCTCATAC TGCGGCTCAA CGACGTGCGC CGCTTCGGCT CGATTCACTT CACCTCCGGC
GATCCGCTAA AGCACAAACT TTTGCGGGGA ATCGGGCCGG AACCCTTGAC CGATGAGCTC
ACCGGTCACT ACCTCTACCG CAAAAGCCGC GGCAAGAAGG CGCCCCTGCA GCGCTTCCTG
ATGGACAGCT CCGTGGTCGC CGGTCTCGGC AACATCTACG CGGCAGAGAC GCTGTTTCGC
TGCGGCATGC TTCCGTTCAC GCAGGCGGGC TCCCTCTCCG AGGGCGACTG CGACAGGCTT
TGCGACTGTA TCAAGAAAAC CCTCGCCGCC TCCATCGAGG CCGGTCGCGT CATGGATTTC
ACCGTCCGCG AGGAGAAGCT CGTCTATTTC CCGCAGCAGC TCTACGTCTA CGGCAGGGAA
GGGCTCGCCT GCCGGGAGTG CGGCAGCGCC ATTGAGCGGG GAAGGCTCGG CAACCGCTCC
ACCTTCCACT GCCCCCGCTG CCAGAGCCGG CTTTAA
|
|---|
| Protein sequence | MPELPEVEVT RLGIAAQLVG ARIAAVAVHS PKLRTLVPPE LPSILAGQSI LSLTRRGKYL
IITCRQGSLL LHLGMTGHLR LVPAGAGAGA HDHFDLVLES GLILRLNDVR RFGSIHFTSG
DPLKHKLLRG IGPEPLTDEL TGHYLYRKSR GKKAPLQRFL MDSSVVAGLG NIYAAETLFR
CGMLPFTQAG SLSEGDCDRL CDCIKKTLAA SIEAGRVMDF TVREEKLVYF PQQLYVYGRE
GLACRECGSA IERGRLGNRS TFHCPRCQSR L
|
|---|
| |