Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2037 |
Symbol | |
ID | 8137373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | + |
Start bp | 2361087 |
End bp | 2362226 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644869652 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_003021847 |
Protein GI | 253700658 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000000000000596452 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAAAGA TTCTGGTGGT ACTCGGCATC ACGATGCTTC TGTGCAGCGC CAGCGCCGCA CTCGCCGCGG CGCCGATCAA GATCGGCGGC CTGTTCGCCG TTACCGGTCC CGCAGCTTTC CTCGGCGAAC CGGAGAAGAA AACGCTGGAG CTGCTGGTCA AAGAGGCGAA CGCCAAGGGC GGCATCAACG GCTCGAAGAT CGAGCTGGTC GTCTACGACA CAGGCGGCGA CGTCACCAAG GCCGTTCAGC TCGCCAACAA GCTGATCAAA AACGACAAGG TCTCCGCCAT CGTCGGCCCC AGCACCACCG GCGAAACCAT GGCCGTCATC CCCATCGCCG AGAAGGAGCA GGTCCCGCTC ATCTCCTGCG CCGCGGGGAT CAAGATCACC GCCCCGGTGA AGAAATGGGT CTTCAAGACC CCGGCCAACG ACCACGTCGC CGCAGAAAAG ATCCTGCTCC AGGCTGCCAG ACTAAAGCAA AAGAACATCG CCATTCTCAC CGTTTCCGAT TCCTTCGGCT CTTCCGGGCG CGAGCAGTTG AAGCAGATGG CGGCGAAGCA CGGCTTCAAG GTCGTAGCCG ACGAGGTCTA CGGTCCCAAA GACACCGACA TGACCCCGCA GCTCACCAAG ATCAAGGCCG CCAAGCCTGA CGCCATCATC TGCTGGGGGA CCAACCCCGG CCCGGCCATC ATCACCCGCA ACGTGCGGCA GTTGGGCATC AAGGCCCAGC TCTATCAAAG CCACGGCGTC GCCTCCAAGA AGTACATCGA ACTCGCCAGC GCCCAGGCCG CTCAGGGGGT CATGCTCCCG GCCGGAAAGC TCGCCGTCTT CGACCTCTTG AAGAAAACCG ACCCGCAGGC GAAGCTCCTC AAGGATTACA ACGACTCCTA CAGGAAGGCC TACGGCGTCG AGGCGTCCAC CTTCGGCGGC TACGCCTACG ACGGCTTCCT GCTCGTCGCC CAAGCGGTGA AAAAAGGCGC CTTCACTCGG GCGCAGATCC GCGACGGCAT CGAGAAGGGG GGGAGCATGG TCGGGGTGTC CGGCATCTTC AAGATGACCC CCAAGGACCA TAACGGTCTC GACCTCTCCG CCTTCGAGAT GGTCCGCATC GACAAAGGCG ACTGGGTGAT CGTACGCTGA
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Protein sequence | MRKILVVLGI TMLLCSASAA LAAAPIKIGG LFAVTGPAAF LGEPEKKTLE LLVKEANAKG GINGSKIELV VYDTGGDVTK AVQLANKLIK NDKVSAIVGP STTGETMAVI PIAEKEQVPL ISCAAGIKIT APVKKWVFKT PANDHVAAEK ILLQAARLKQ KNIAILTVSD SFGSSGREQL KQMAAKHGFK VVADEVYGPK DTDMTPQLTK IKAAKPDAII CWGTNPGPAI ITRNVRQLGI KAQLYQSHGV ASKKYIELAS AQAAQGVMLP AGKLAVFDLL KKTDPQAKLL KDYNDSYRKA YGVEASTFGG YAYDGFLLVA QAVKKGAFTR AQIRDGIEKG GSMVGVSGIF KMTPKDHNGL DLSAFEMVRI DKGDWVIVR
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