| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1853 |
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| Symbol | |
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| ID | 8137184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | + |
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| Start bp | 2155962 |
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| End bp | 2156948 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644869464 |
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| Product | TRAP transporter solute receptor, TAXI family |
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| Protein accession | YP_003021664 |
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| Protein GI | 253700475 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.45766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGC ACCGGCGTTA CCCGCGCTTA CTGGCGCTCC TTGTGACAGT CACCGTCCTG
TTCGTCCCCT GTTCTCTCAC CGCCTTTCAG TATCCCTCAC TCACCATCTC CTCCGGGACC
ACCACCGGTT CCTATTATGC CGCCGCCAGT GCCATAGCGA AGGTGTTCAA CCCCAGCAGC
GGCCGCAACG GCGTGAGGCT CGCCACGGTC GCCTCGCCCG GGTCGGTGGC CAACATCGAC
CAGGTCGCCG ACGGCAAGGC CGCCTTCGGC ATCGCCGAGA CGGAGCTTTT GAAGCGGGCC
ACGCTGGGGG TGCGACCCTG GGAAGGGAAG GCGCGCACCG GCCTGCGCGC GATATTTAGC
ATCTACGTCG AGAGCGTCAC CGTCGTCGCC GCGGTCGACA GCGGCATCAA GCGGGTGAGC
GACCTGAAGG GGAAGCGGCT GAATATCGGC GCGCCTGGCT CGATAGACAA CACCTATGCG
GCCGCTTTCC TGCAGATGTC CGGGCTGAAC CCTGGGCTGG TGGTCACCTC GCAGCACTCA
ACCGCGATCG CGCCCGAACT GTTGCAAAAA GGAGAGATCG ACGCCTACCT CTGCATCGTC
GGCCATCCGA ACCTGACCGT GCTGGAAGCG AGCGCAGGCA AGCGCAAGGT CACCTTGATA
TCCCTGGACA ACGCCCTGAT CCAGCAGGTG GTCGGCCACA ACCCGCTGCT GATGGCCGTC
GCCATACCCA CCAACTTCTA TCCCAGAGTC GAAGTCAGCG GCAAGGTCCC CACCATCGGC
CTGCGCGCCG TTCTCTTCAC CTCGGCCGAT CAGCCCGAGG AAATCGTGTA CGCGGTGGTG
CGGGAGGTCA TGTCCAACCT CGACCTGTTC CGCCGCCAGC ATCCCATCCT GCAGAATCTC
TCCCCGCGGG ACGCCGCAAA GGTCGGGGCC ATTGCGCTTC ACCCCGGCGC CCTCCGATAT
TTCAAAGAGG CAGGCCTCGT TCCCTGA
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| Protein sequence | MTRHRRYPRL LALLVTVTVL FVPCSLTAFQ YPSLTISSGT TTGSYYAAAS AIAKVFNPSS
GRNGVRLATV ASPGSVANID QVADGKAAFG IAETELLKRA TLGVRPWEGK ARTGLRAIFS
IYVESVTVVA AVDSGIKRVS DLKGKRLNIG APGSIDNTYA AAFLQMSGLN PGLVVTSQHS
TAIAPELLQK GEIDAYLCIV GHPNLTVLEA SAGKRKVTLI SLDNALIQQV VGHNPLLMAV
AIPTNFYPRV EVSGKVPTIG LRAVLFTSAD QPEEIVYAVV REVMSNLDLF RRQHPILQNL
SPRDAAKVGA IALHPGALRY FKEAGLVP
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