| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GM21_1744 |
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| Symbol | |
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| ID | 8137075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sp. M21 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012918 |
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| Strand | - |
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| Start bp | 2029596 |
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| End bp | 2033756 |
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| Gene Length | 4161 bp |
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| Protein Length | 1386 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644869356 |
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| Product | SNF2-related protein |
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| Protein accession | YP_003021556 |
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| Protein GI | 253700367 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 115 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCTCTC CCATTAACCT GAGCGAAAAG CTTCTCGATA CCTTCTTCTC CTGCGCACCC
GAGGAGAGGA CGCTGCTGCA ACTTCTCTCC GTACTTTACG CGCCCCTATC CAAAAACGTC
CTCCTCAACG TGATCCGGCG CCTGGGCGCC CCAGCCCCCG GCGGACGCTC CTACACCGGC
CTCCTGCTGT CGGAAATGCT GGAAAGACTC GCCCACCAAA AACTGCTGGT GCAGGGTAAT
GACGGCATCC GCTGCGACAT GCGCATCGCG CACGCCGCCA CCCTGAGCGC CGTCGCCGAT
GGCGCCTTCC CGCGCATGGT CTCCGCCATC CACGCGGAGA TACCGATGGA GACCGACTGG
GGGAGCAGCT ATTACCGTAC CCAACTGCAC GCCCTGCGGG ACGTCCGCAT CGCCTTCTAC
GCCAAGGATG AGAGGCTCGC CTTCGAGATG GAGTCGCGCT TCAAACGGCA GTTCCCCTAC
GACCTGATGC GCTGCCACCC CTTCGTCACC GTCTGCACCG CCCCCTTCGA CGTCGAATGG
TTCCGGTCGC TTCCCATCAA GCTGCAGGGA GCCGCCCTGA AGGAGATCCT CGCCCACGCC
GGCGCGCATC TTCTTCCCGC GCAGGCCCCT TTTGCCGTCC TGGCCGACTT GGCGACCGCG
AAGGGAGTGA CCCAGGAACT CTACGACGTC CTCTGCATCG AGCTGCTGCT GCGGGGGGAG
ATCGACGCCG CCGCGAAGGC GTCCAGTGAA GGGGCCAGTT CCACCGAGAC CGCCATCTTC
GCTTCGGTGC AAATGCTGCA CGGCGCCTAC CGGGATTCAG CCGACACCTT CGAAGGCGCG
CTCTCCCGAT TGCGCAAAGA AACCGGCAAG CGCAAAACCT TCTTCGACAA CGTCACCGGT
CCCTTGTACA TCCTGGCCCT GATGGCGACC GGTGAGGAGC GTGCCCTCAA ACAGGCGAGC
GATCACTGCA CCTTCGTCCT CGGGAAGAAG GAATGGCCCC ACCAGGACCT CTACCTGGTC
CTCAAGCACG TGGCCGCGGA ACGAAACGGC GAGCGCGGTT CCTCCCATTA CCTGGAAGCA
CTCGCCGCCT CCCCCCCGTT CGACATTTCA CCCTTCTACG CCCTTTTCTG CGTGATGTCC
CTGCACTGGT GCGGGTCCGA GAAGGCAGTG GAGAAGGCTG CAAAATTGAC CCCACTGATC
CGCCAGGCGC GCGATGCAGG CTACCTCTGG CTTGCCGACG AGCTGGAATG GACCGCGCTG
GAATGCGGCG TTTTGCCTGC TCCCGCTCCA AAGAGCGCCA GACGCGAAAA GCAAAAGGGG
CTCGTGCCCC TGATTCACGC CATAGCCAAA GTCGAGTTCT GGGAGACGGC CCTCCAGGCG
CTGATCAGGC TGAACCGCGA CGAGGAAGAG GTGGAGCAAA AACCGGTGTC GCAGTCCCGC
CTCATCTGGC ACTTCGACGA GAAGCGCGGC TACTACGAGA TCCACCCGCG CGAACAAAAG
CAGGCGCAAA ACGGCAAATG GAGTTCGGGG AGGAACATCT CCCTCAAACG CCTCGCCGAA
GACGCAGCGG GAATCGACTT CCTCACCGAG CAGGACCGGC TCGTCTGCGC CTGCATCAAA
CTCGAACGCG GCCACGGCTA TTACAGCCGC GACAACTACG AACTGAACCA GGACCTGGCC
CTGCCGCTCA TGACCGGGCA CCCGCACCTC TACCTCGACC CGGCGGCCAC GGTGCACCTG
GAACTGGTGC GCGGCGAGCC AGAGATCCAG CTGACCACCG AAGGGGACAC CCTGAAGCTG
CAGATCGCTC CCCAGTTCGC GCCGGATCAG AAGACCCACC TGCAGAAGGA GACCCCGACC
CGGCTGAAGG TTTACCAGGT GAAGGAGGAG TACCGCAGGA TCGCGGCCAT CGTCGGCAGC
GGCCTCAAGC TTCCCGCCAA GGCGAAGCAG CAGGCGCTGG CGGCGATCCA TTCCCTGGCG
ACACTGGTCA CGGTGCACTC GGACATCGAG GACGCGACCA TCGAACAGCT TCCAAGCGAC
AGCACCCCCT GCTTCCATCT CCTCCCCTAC CAGGCGGGTT TGCGGCTGGA GCTGCTGGTC
AGCCCCCTGT CCGAAAGCGG CCCCTGTTTC CGCCCCGGCA CCGGGGGCGA AACCCTGATG
GCCGTCCTCG AAGGGAAAAA GGTGCAGGCC AAGCGGGACC TGCAGCTAGA AGTCATCCGC
GCGGCCGAAG CGGTCGCAGC CCTCCCCGTC CTCTCCGAAA GCGAGGAATG GGAGGGGGAA
TGGCTGGTCC CTTCTACCGA GAAGTCGCTG GAACTGCTGC TTCAGCTACA GGCGCTGGGG
GAAGCGGTGC GCGTTTCCTG GCCGGAGGGG GCACGCTTCA AGATCAAGCA GATCGCCACC
CCCGGGCACT GCCGTCTGGT CATCAAGCAG GCGAAAGACT GGTTCGAGCT GGAGGGGGAA
GTGAAGCTGA ACGAGGGACT CTCCCTCGAC CTGCGGCAAC TGGTCGAGCT CGCCAAGGAT
TCCCCCGGCC GCTTCATCCG CCTGGCCGAC GGCGACTTCC TGGCACTCTC CGCACAGCTC
AAAAAGCACC TGGACGACCT CGCGGCCTGC GCCGATCCCC ACGGCAGCAA CGCCTTCCGC
TTCCACCCCT TAGCCTCCCC CGTCTTCGAG GAATTCGCCG GGCAGGCCGG GACCTTCGAG
GCCGATCAAC AGTGGCTGCG CCAACTCAAA AGGCTGCACG AGGCCGAAGC CTTCCGCCCC
CAACTCCCCG CAACGCTGCA GGCCGATCTG CGCGGCTACC AGGAAGAAGG GTTCAACTGG
CTCAACCGGT TGGCCCGCTG GGGGGTGGGA GCCTGCCTCG CCGACGACAT GGGACTCGGA
AAGACGGTCC AGGCGCTGGC GCAGATAATC TCCATGGCGG AGGGGGGGCC GTCGCTGGTG
GTCGCTCCCA CCTCGGTCTG CCTCAACTGG GAAAGCGAGA CCCTCAAGTT CGCCCCCACC
CTGAACCCCA TCGTCTTCGG GGGACAAAAC CGCGCGAGGC TCCTCCAGGA GCTGAAGCCC
TTCGACCTGG TCATCTGCAG CTACGGACTT TTGCAGCAGG AGGGGGAACT CTTGGCCGCG
GTTAAGTGGC AGATGATCGT CCTGGACGAG GCGCAGGCGA TCAAGAACAT GGCGACCAAG
AGAAGCCAGG CCGCCATGGA GCTTAATGGC GCCTTCAAGA TGGTGGCCAC CGGCACCCCC
ATCGAGAACC ACCTGGGGGA ACTCTGGAAC GTGTTCCGGT TCATCAACCC GGGGCTTCTC
GGGAGCCTGA AGCAGTTCAA CGTCAAGTTC GCCGCCCCCA TCGAAAAGAG CCAGGACAAG
AAGGCCCGCG CCCGTCTCAA GAAGCTGATC CAGCCCTTCA TCCTGCGCCG CACCAAGAAC
CAGGTACTGG AGGAGCTCCC GCCGCGCACC GAAATCGTCA TGAAGGTCGA GATGAGCGAA
GAAGAGGCGT CGCTGTACGA GGCGATCAGG AAAAGCGCGC TCGACAACCT GGCCGGCGTC
GGCAAAGTCG AGGGGAAGGG AGAGCTGCAC CTGAAGATCC TCGCCGAGAT CATGAGGCTG
CGCCGCGCCT GCTGCAACCC GCGCCTGGTC CTTCCCGACA CCCCGATCCC GAGCACGAAG
CTCGCCGCCT TCGGCGAGAT CGTTGAGGAG TTGCGCGAGA ACCGCCACAA GGCGCTCGTC
TTCAGCCAGT TCGTCGGGCA CCTGGAACTC ATCAGGCAGT ACGTCGAGAA GAATGGCATC
CCGTACCAGT ACCTCGACGG CAGCACGCCG CCCCAGGAGC GCAAGAGGCG CGTCGACGCC
TTCCAAAGCG GCAGCGGCGA CCTGTTCCTG ATCAGCCTCA AGGCGGGAGG AGTCGGTCTC
AACCTGACCG CCGCCGACTA CGTCATCCAC ATGGACCCTT GGTGGAACCC CGCCGTCGAG
GACCAGGCCT CCGACCGCGC CCACCGCATC GGACAAAAGC GCCCCGTCAC CATCTACCGT
CTCGTGACCC GTGGGACCAT AGAAGAGAAG ATCGTCGGCC TGCACCAGCA AAAGCGCGGC
CTTGCCGACA GTCTCCTCGA CGAGAGCGAC CTGAGCGGCC GAATCAGCGC AGAAGAGCTG
CTGGCGCTAT TGCGGAAATA G
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| Protein sequence | MPSPINLSEK LLDTFFSCAP EERTLLQLLS VLYAPLSKNV LLNVIRRLGA PAPGGRSYTG
LLLSEMLERL AHQKLLVQGN DGIRCDMRIA HAATLSAVAD GAFPRMVSAI HAEIPMETDW
GSSYYRTQLH ALRDVRIAFY AKDERLAFEM ESRFKRQFPY DLMRCHPFVT VCTAPFDVEW
FRSLPIKLQG AALKEILAHA GAHLLPAQAP FAVLADLATA KGVTQELYDV LCIELLLRGE
IDAAAKASSE GASSTETAIF ASVQMLHGAY RDSADTFEGA LSRLRKETGK RKTFFDNVTG
PLYILALMAT GEERALKQAS DHCTFVLGKK EWPHQDLYLV LKHVAAERNG ERGSSHYLEA
LAASPPFDIS PFYALFCVMS LHWCGSEKAV EKAAKLTPLI RQARDAGYLW LADELEWTAL
ECGVLPAPAP KSARREKQKG LVPLIHAIAK VEFWETALQA LIRLNRDEEE VEQKPVSQSR
LIWHFDEKRG YYEIHPREQK QAQNGKWSSG RNISLKRLAE DAAGIDFLTE QDRLVCACIK
LERGHGYYSR DNYELNQDLA LPLMTGHPHL YLDPAATVHL ELVRGEPEIQ LTTEGDTLKL
QIAPQFAPDQ KTHLQKETPT RLKVYQVKEE YRRIAAIVGS GLKLPAKAKQ QALAAIHSLA
TLVTVHSDIE DATIEQLPSD STPCFHLLPY QAGLRLELLV SPLSESGPCF RPGTGGETLM
AVLEGKKVQA KRDLQLEVIR AAEAVAALPV LSESEEWEGE WLVPSTEKSL ELLLQLQALG
EAVRVSWPEG ARFKIKQIAT PGHCRLVIKQ AKDWFELEGE VKLNEGLSLD LRQLVELAKD
SPGRFIRLAD GDFLALSAQL KKHLDDLAAC ADPHGSNAFR FHPLASPVFE EFAGQAGTFE
ADQQWLRQLK RLHEAEAFRP QLPATLQADL RGYQEEGFNW LNRLARWGVG ACLADDMGLG
KTVQALAQII SMAEGGPSLV VAPTSVCLNW ESETLKFAPT LNPIVFGGQN RARLLQELKP
FDLVICSYGL LQQEGELLAA VKWQMIVLDE AQAIKNMATK RSQAAMELNG AFKMVATGTP
IENHLGELWN VFRFINPGLL GSLKQFNVKF AAPIEKSQDK KARARLKKLI QPFILRRTKN
QVLEELPPRT EIVMKVEMSE EEASLYEAIR KSALDNLAGV GKVEGKGELH LKILAEIMRL
RRACCNPRLV LPDTPIPSTK LAAFGEIVEE LRENRHKALV FSQFVGHLEL IRQYVEKNGI
PYQYLDGSTP PQERKRRVDA FQSGSGDLFL ISLKAGGVGL NLTAADYVIH MDPWWNPAVE
DQASDRAHRI GQKRPVTIYR LVTRGTIEEK IVGLHQQKRG LADSLLDESD LSGRISAEEL
LALLRK
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